Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VTNP04004 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
VTNP04004 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VTNP04004 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.23■□□□□ 0.19
VTNP04004 AL035414.1-201ENST00000451327 857 ntBASIC16.23■□□□□ 0.19
VTNP04004 RN7SL720P-201ENST00000488178 304 ntBASIC16.23■□□□□ 0.19
VTNP04004 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.23■□□□□ 0.19
VTNP04004 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
VTNP04004 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.23■□□□□ 0.19
VTNP04004 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.23■□□□□ 0.19
VTNP04004 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 AC092135.3-201ENST00000624151 1846 ntBASIC16.23■□□□□ 0.19
VTNP04004 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 AC023157.3-201ENST00000619086 2088 ntBASIC16.23■□□□□ 0.19
VTNP04004 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTNP04004 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.23■□□□□ 0.19
VTNP04004 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VTNP04004 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 AC144522.1-201ENST00000625111 1658 ntBASIC16.22■□□□□ 0.19
VTNP04004 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 RN7SL769P-201ENST00000469386 295 ntBASIC16.22■□□□□ 0.19
VTNP04004 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.22■□□□□ 0.19
VTNP04004 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.22■□□□□ 0.19
VTNP04004 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 AC079328.1-201ENST00000560358 952 ntBASIC16.22■□□□□ 0.19
VTNP04004 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 AF254983.2-201ENST00000612331 135 ntBASIC16.22■□□□□ 0.19
VTNP04004 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VTNP04004 AJ011931.1-201ENST00000618749 2492 ntBASIC16.22■□□□□ 0.19
VTNP04004 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTNP04004 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
VTNP04004 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
VTNP04004 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
VTNP04004 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 CYP4F23P-201ENST00000593402 1579 ntBASIC16.21■□□□□ 0.19
VTNP04004 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 TMBIM7P-202ENST00000641474 1516 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms