Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDGFBP01127 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFBP01127 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFBP01127 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFBP01127 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFBP01127 TRMT112P3-201ENST00000580149 358 ntBASIC14.72□□□□□ -0.05
PDGFBP01127 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.72□□□□□ -0.05
PDGFBP01127 LINC00244-201ENST00000625073 613 ntBASIC14.72□□□□□ -0.05
PDGFBP01127 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFBP01127 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFBP01127 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDGFBP01127 PCDHA12-202ENST00000613593 2588 ntBASIC14.72□□□□□ -0.05
PDGFBP01127 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFBP01127 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 TEKT4P2-202ENST00000559466 1312 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFBP01127 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PDGFBP01127 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFBP01127 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFBP01127 AC018638.5-201ENST00000450885 754 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 AC006529.1-201ENST00000459978 637 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFBP01127 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.71□□□□□ -0.05
PDGFBP01127 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PDGFBP01127 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.71□□□□□ -0.05
PDGFBP01127 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFBP01127 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PDGFBP01127 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFBP01127 RN7SL121P-201ENST00000584223 273 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 AC008972.2-201ENST00000606587 494 ntBASIC14.71□□□□□ -0.05
PDGFBP01127 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PDGFBP01127 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFBP01127 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFBP01127 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PDGFBP01127 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
PDGFBP01127 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.71□□□□□ -0.06
PDGFBP01127 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFBP01127 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms