Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.57□□□□□ -0.4
ABCA1O95477 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 MARK2P5-201ENST00000507649 634 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.57□□□□□ -0.4
ABCA1O95477 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.57□□□□□ -0.4
ABCA1O95477 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 AC100757.4-201ENST00000626934 759 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 INTS4P1-203ENST00000641008 3683 ntBASIC12.56□□□□□ -0.4
ABCA1O95477 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ABCA1O95477 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 RN7SKP214-201ENST00000364208 315 ntBASIC12.56□□□□□ -0.4
ABCA1O95477 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.56□□□□□ -0.4
ABCA1O95477 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.56□□□□□ -0.4
ABCA1O95477 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.56□□□□□ -0.4
ABCA1O95477 AC008267.1-201ENST00000474858 1069 ntBASIC12.56□□□□□ -0.4
ABCA1O95477 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.56□□□□□ -0.4
ABCA1O95477 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.56□□□□□ -0.4
ABCA1O95477 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ABCA1O95477 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.56□□□□□ -0.4
ABCA1O95477 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ABCA1O95477 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 AC006480.2-201ENST00000609770 1337 ntBASIC12.55□□□□□ -0.4
ABCA1O95477 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ABCA1O95477 AL355334.1-201ENST00000417713 215 ntBASIC12.55□□□□□ -0.4
ABCA1O95477 AC114812.1-204ENST00000449669 728 ntBASIC12.55□□□□□ -0.4
ABCA1O95477 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ABCA1O95477 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.55□□□□□ -0.4
ABCA1O95477 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ABCA1O95477 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms