Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
PMPCBO75439 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.18■□□□□ 0.02
PMPCBO75439 KRT17P7-201ENST00000451704 1104 ntBASIC15.18■□□□□ 0.02
PMPCBO75439 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.18■□□□□ 0.02
PMPCBO75439 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.18■□□□□ 0.02
PMPCBO75439 GNRHR2-203ENST00000581100 1187 ntBASIC15.18■□□□□ 0.02
PMPCBO75439 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.18■□□□□ 0.02
PMPCBO75439 BTNL10-201ENST00000595971 695 ntBASIC15.18■□□□□ 0.02
PMPCBO75439 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.18■□□□□ 0.02
PMPCBO75439 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 AC003102.2-201ENST00000589195 1469 ntBASIC15.18■□□□□ 0.02
PMPCBO75439 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 SNX18-202ENST00000343017 3140 ntBASIC15.18■□□□□ 0.02
PMPCBO75439 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PMPCBO75439 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PMPCBO75439 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.18■□□□□ 0.02
PMPCBO75439 CLUHP2-201ENST00000426660 1303 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PMPCBO75439 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 AP001267.2-201ENST00000532619 2086 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PMPCBO75439 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PMPCBO75439 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PMPCBO75439 AC092933.1-201ENST00000393644 945 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 POM121L8P-201ENST00000417732 1281 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 POM121L9P-203ENST00000441984 1285 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.17■□□□□ 0.02
PMPCBO75439 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 AC005225.4-201ENST00000557330 545 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 AC025279.2-201ENST00000569730 653 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
PMPCBO75439 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 AL022328.1-201ENST00000610050 478 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 AC012645.4-201ENST00000610691 1061 ntBASIC15.17■□□□□ 0.02
PMPCBO75439 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.17■□□□□ 0.02
PMPCBO75439 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
PMPCBO75439 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PMPCBO75439 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms