Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 AC022616.1-201ENST00000518688 554 ntBASIC14.44□□□□□ -0.1
SEC22BO75396 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.44□□□□□ -0.1
SEC22BO75396 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.44□□□□□ -0.1
SEC22BO75396 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 AC152010.1-201ENST00000415779 2006 ntBASIC14.44□□□□□ -0.1
SEC22BO75396 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 AGGF1P1-201ENST00000509500 2073 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 AC136759.1-202ENST00000530858 2194 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 AC114812.1-204ENST00000449669 728 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 AC055876.2-201ENST00000531834 546 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 DUX4L47-201ENST00000566374 394 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.43□□□□□ -0.1
SEC22BO75396 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22BO75396 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SEC22BO75396 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 SLC7A15P-201ENST00000424028 1363 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22BO75396 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 AC087386.2-201ENST00000623212 4637 ntBASIC14.43□□□□□ -0.1
SEC22BO75396 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22BO75396 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22BO75396 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SEC22BO75396 KRT8P22-201ENST00000562317 1415 ntBASIC14.42□□□□□ -0.1
SEC22BO75396 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SEC22BO75396 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SEC22BO75396 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SEC22BO75396 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 RNU1-114P-201ENST00000365297 166 ntBASIC14.42□□□□□ -0.1
SEC22BO75396 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEC22BO75396 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SEC22BO75396 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22BO75396 RNA5SP421-201ENST00000516864 134 ntBASIC14.42□□□□□ -0.1
SEC22BO75396 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.42□□□□□ -0.1
SEC22BO75396 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms