Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.16■□□□□ 0.02
RIPK2O43353 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.16■□□□□ 0.02
RIPK2O43353 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.16■□□□□ 0.02
RIPK2O43353 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 AC069262.1-201ENST00000539058 672 ntBASIC15.16■□□□□ 0.02
RIPK2O43353 AC107373.2-201ENST00000607735 490 ntBASIC15.16■□□□□ 0.02
RIPK2O43353 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.16■□□□□ 0.02
RIPK2O43353 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 AC015909.5-201ENST00000624336 2266 ntBASIC15.16■□□□□ 0.02
RIPK2O43353 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 AL591122.2-201ENST00000624125 1853 ntBASIC15.16■□□□□ 0.02
RIPK2O43353 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPK2O43353 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RIPK2O43353 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPK2O43353 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.16■□□□□ 0.02
RIPK2O43353 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RIPK2O43353 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.15■□□□□ 0.02
RIPK2O43353 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPK2O43353 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.15■□□□□ 0.02
RIPK2O43353 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPK2O43353 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.15■□□□□ 0.02
RIPK2O43353 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RIPK2O43353 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPK2O43353 NUTM2HP-201ENST00000442076 2498 ntBASIC15.15■□□□□ 0.02
RIPK2O43353 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RIPK2O43353 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RIPK2O43353 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RIPK2O43353 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms