Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AC073548.1-201ENST00000624088 1882 ntBASIC10.96□□□□□ -0.65
SMKR1H3BMG3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AC007967.2-201ENST00000432613 625 ntBASIC10.96□□□□□ -0.65
SMKR1H3BMG3 KRT18P64-201ENST00000434946 1219 ntBASIC10.96□□□□□ -0.65
SMKR1H3BMG3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 SLED1-202ENST00000512051 380 ntBASIC10.96□□□□□ -0.65
SMKR1H3BMG3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.96□□□□□ -0.65
SMKR1H3BMG3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
SMKR1H3BMG3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 MIR346-201ENST00000362234 95 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AC074338.1-201ENST00000416825 156 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 SPCS2P4-201ENST00000436160 681 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AC079781.3-201ENST00000449110 356 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AC079776.4-201ENST00000511039 504 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 IGHV3-22-201ENST00000520721 359 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 Z83851.2-201ENST00000609564 659 ntBASIC10.95□□□□□ -0.66
SMKR1H3BMG3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMKR1H3BMG3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms