Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ZNF767P-206ENST00000513792 565 ntBASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AL008638.5-201ENST00000623814 1298 ntBASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AL023775.1-201ENST00000454907 1746 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AL157414.3-201ENST00000624276 1954 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 POM121L8P-201ENST00000417732 1281 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 POM121L9P-203ENST00000441984 1285 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PPY2P-201ENST00000582808 702 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AL096828.3-201ENST00000615354 462 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AL360270.3-201ENST00000609118 1348 ntBASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA2E9PIF3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 KRT8P4-201ENST00000509735 1454 ntBASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms