Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 GGTLC4P-201ENST00000402176 664 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AL137244.1-201ENST00000422931 865 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AP000244.1-201ENST00000424582 201 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 IFNWP2-201ENST00000431203 580 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 RN7SL128P-201ENST00000467883 305 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 RN7SL371P-201ENST00000578099 267 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AC139713.2-207ENST00000641556 1292 ntBASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88BA6NKF7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88BA6NKF7 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88BA6NKF7 MTHFR-217ENST00000641820 1569 ntBASIC16.89■□□□□ 0.3
TMEM88BA6NKF7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88BA6NKF7 AC079328.2-201ENST00000561241 3354 ntBASIC16.89■□□□□ 0.3
TMEM88BA6NKF7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 MED15P3-201ENST00000413613 326 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AC026412.1-206ENST00000502273 206 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AP000920.1-201ENST00000531824 344 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AC145285.5-201ENST00000562217 361 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 CES1P2-201ENST00000566467 1242 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 NDUFB10P1-201ENST00000567319 521 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AP005264.5-201ENST00000590066 467 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 GGNBP1-204ENST00000613113 887 ntBASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM88BA6NKF7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms