Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AC244394.1-201ENST00000435000 1665 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 MARK2P5-201ENST00000507649 634 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AC009884.2-201ENST00000603110 324 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AC027601.3-201ENST00000622907 509 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AC138035.3-201ENST00000622706 2791 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.81□□□□□ -0.04
TBC1D3FA6NER0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 PUDPP3-201ENST00000445368 636 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 RN7SL769P-201ENST00000469386 295 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 AC097724.1-201ENST00000609581 426 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 BX088702.1-201ENST00000610784 235 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 AL157791.1-201ENST00000553667 1699 ntBASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TBC1D3FA6NER0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms