Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 TLE1P1-201ENST00000422965 589 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 FAM58DP-201ENST00000428076 619 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 HTR5BP-201ENST00000430851 1154 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 AL353779.1-201ENST00000434793 351 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 AC009078.2-202ENST00000463353 338 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 SDHAP3-202ENST00000515467 728 ntBASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DUXBA0A1W2PPF3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 AL158070.2-201ENST00000623713 1621 ntBASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
DUXBA0A1W2PPF3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 KRT8P14-201ENST00000414254 1442 ntBASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 GPS2P2-201ENST00000430745 888 ntBASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 RN7SL618P-201ENST00000477850 296 ntBASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 MIR6080-201ENST00000617359 66 ntBASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 AC090643.2-201ENST00000623442 2029 ntBASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
DUXBA0A1W2PPF3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.19□□□□□ -0.46
DUXBA0A1W2PPF3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms