Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGC4Q9Y5F7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDHGC4Q9Y5F7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 AL356441.2-201ENST00000443009 864 ntBASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 MIR6722-201ENST00000617286 78 ntBASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC4Q9Y5F7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC4Q9Y5F7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC4Q9Y5F7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHGC4Q9Y5F7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHGC4Q9Y5F7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 AC093323.1-202ENST00000635031 2045 ntBASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC4Q9Y5F7 ABCB10P4-201ENST00000566803 2184 ntBASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
PCDHGC4Q9Y5F7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGC4Q9Y5F7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGC4Q9Y5F7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 ALDH1A3-203ENST00000557963 1670 ntBASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGC4Q9Y5F7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 MIR6724-1-201ENST00000616420 92 ntBASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 MIR6724-2-201ENST00000616483 92 ntBASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 MIR6724-4-201ENST00000617390 92 ntBASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 MIR6724-3-201ENST00000622482 92 ntBASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHGC4Q9Y5F7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC4Q9Y5F7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms