Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 THA1P-201ENST00000590384 1145 ntBASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TSC22D4Q9Y3Q8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSC22D4Q9Y3Q8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSC22D4Q9Y3Q8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.1■■□□□ 1.13
TSC22D4Q9Y3Q8 MIR4281-201ENST00000580852 62 ntBASIC22.1■■□□□ 1.13
TSC22D4Q9Y3Q8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSC22D4Q9Y3Q8 AL022069.1-201ENST00000568025 1636 ntBASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSC22D4Q9Y3Q8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TSC22D4Q9Y3Q8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TSC22D4Q9Y3Q8 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.08■■□□□ 1.13
TSC22D4Q9Y3Q8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TSC22D4Q9Y3Q8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.08■■□□□ 1.13
TSC22D4Q9Y3Q8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
TSC22D4Q9Y3Q8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TSC22D4Q9Y3Q8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSC22D4Q9Y3Q8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSC22D4Q9Y3Q8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.07■■□□□ 1.12
TSC22D4Q9Y3Q8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.07■■□□□ 1.12
TSC22D4Q9Y3Q8 AF131216.4-201ENST00000638924 1588 ntBASIC22.07■■□□□ 1.12
TSC22D4Q9Y3Q8 AC131274.2-201ENST00000580697 1507 ntBASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSC22D4Q9Y3Q8 YBX1P4-201ENST00000392794 808 ntBASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TSC22D4Q9Y3Q8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 AC103724.3-201ENST00000564481 992 ntBASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSC22D4Q9Y3Q8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 AC012676.1-201ENST00000574705 1949 ntBASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSC22D4Q9Y3Q8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TSC22D4Q9Y3Q8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms