Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL158047.1-201ENST00000445918 881 ntBASIC9.72□□□□□ -0.85
MACF1Q9UPN3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 AL135925.1-201ENST00000605920 1701 ntBASIC9.72□□□□□ -0.85
MACF1Q9UPN3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 AC137761.2-201ENST00000561729 223 ntBASIC9.71□□□□□ -0.85
MACF1Q9UPN3 AC145350.3-201ENST00000569033 163 ntBASIC9.71□□□□□ -0.85
MACF1Q9UPN3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 COX20-201ENST00000366528 568 ntTSL 2 BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 AC073912.3-201ENST00000624414 853 ntBASIC9.71□□□□□ -0.85
MACF1Q9UPN3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC9.71□□□□□ -0.85
MACF1Q9UPN3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
MACF1Q9UPN3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
MACF1Q9UPN3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC9.71□□□□□ -0.86
MACF1Q9UPN3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
MACF1Q9UPN3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
MACF1Q9UPN3 TSPY6P-201ENST00000448518 926 ntBASIC9.7□□□□□ -0.86
MACF1Q9UPN3 RPS2P4-201ENST00000476944 856 ntBASIC9.7□□□□□ -0.86
MACF1Q9UPN3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 AC008550.1-201ENST00000511500 884 ntBASIC9.7□□□□□ -0.86
MACF1Q9UPN3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 AC126544.1-201ENST00000580842 1059 ntBASIC9.7□□□□□ -0.86
MACF1Q9UPN3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
MACF1Q9UPN3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 IGHV3-19-201ENST00000521488 291 ntBASIC9.69□□□□□ -0.86
MACF1Q9UPN3 USP36-216ENST00000589424 970 ntTSL 5 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC9.69□□□□□ -0.86
MACF1Q9UPN3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 LINC01023-201ENST00000606054 436 ntBASIC9.68□□□□□ -0.86
MACF1Q9UPN3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
MACF1Q9UPN3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 ITM2C-210ENST00000620962 501 ntBASIC9.67□□□□□ -0.86
MACF1Q9UPN3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
MACF1Q9UPN3 AC006455.2-201ENST00000429931 906 ntBASIC9.66□□□□□ -0.86
MACF1Q9UPN3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 AC092171.4-201ENST00000609130 632 ntBASIC9.66□□□□□ -0.86
MACF1Q9UPN3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC9.66□□□□□ -0.86
MACF1Q9UPN3 LINC02228-203ENST00000641970 1355 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms