Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.26■□□□□ 0.03
SND1-IT1Q9HBX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 MIR3960-201ENST00000583311 91 ntBASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SND1-IT1Q9HBX3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SND1-IT1Q9HBX3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 AL157400.5-201ENST00000507624 621 ntBASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 AC025884.2-201ENST00000553429 711 ntBASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 HLA-L-211ENST00000482052 1765 ntBASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.23■□□□□ 0.03
SND1-IT1Q9HBX3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SND1-IT1Q9HBX3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SND1-IT1Q9HBX3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SND1-IT1Q9HBX3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.21■□□□□ 0.02
SND1-IT1Q9HBX3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SND1-IT1Q9HBX3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SND1-IT1Q9HBX3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms