Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 AC022211.4-201ENST00000625094 2161 ntBASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC34.92■■■■□ 3.18
PTPN23Q9H3S7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
PTPN23Q9H3S7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC34.92■■■■□ 3.18
PTPN23Q9H3S7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC34.92■■■■□ 3.18
PTPN23Q9H3S7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PTPN23Q9H3S7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
PTPN23Q9H3S7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PTPN23Q9H3S7 C17orf82-201ENST00000623772 1530 ntBASIC34.9■■■■□ 3.18
PTPN23Q9H3S7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PTPN23Q9H3S7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
PTPN23Q9H3S7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PTPN23Q9H3S7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 UNC93B3-201ENST00000308076 687 ntBASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
PTPN23Q9H3S7 SUDS3P1-201ENST00000505831 966 ntBASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 AC135279.3-201ENST00000610945 1311 ntBASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 AL161729.1-201ENST00000604104 1402 ntBASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 AC024257.2-201ENST00000549699 147 ntBASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 AL136162.1-201ENST00000607711 1078 ntBASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
PTPN23Q9H3S7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC34.87■■■■□ 3.17
PTPN23Q9H3S7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
PTPN23Q9H3S7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PTPN23Q9H3S7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
PTPN23Q9H3S7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
PTPN23Q9H3S7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 SF1-220ENST00000626028 704 ntTSL 2 BASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 AC009102.2-201ENST00000606772 1639 ntBASIC34.86■■■■□ 3.17
PTPN23Q9H3S7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.85■■■■□ 3.17
PTPN23Q9H3S7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PTPN23Q9H3S7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
PTPN23Q9H3S7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC34.83■■■■□ 3.17
PTPN23Q9H3S7 AC005837.3-201ENST00000612163 286 ntBASIC34.83■■■■□ 3.17
PTPN23Q9H3S7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
PTPN23Q9H3S7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
PTPN23Q9H3S7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.82■■■■□ 3.17
PTPN23Q9H3S7 PTCHD3P2-201ENST00000424937 1205 ntBASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 PBX2P1-201ENST00000493219 1291 ntBASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
PTPN23Q9H3S7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 AP003733.4-201ENST00000623785 1697 ntBASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
PTPN23Q9H3S7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PTPN23Q9H3S7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
PTPN23Q9H3S7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
PTPN23Q9H3S7 MIR935-201ENST00000401179 91 ntBASIC34.79■■■■□ 3.16
PTPN23Q9H3S7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
PTPN23Q9H3S7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms