Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 AL136162.1-201ENST00000607711 1078 ntBASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
ATXN3LQ9H3M9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATXN3LQ9H3M9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 AL022069.1-201ENST00000568025 1636 ntBASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATXN3LQ9H3M9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 AC022211.4-201ENST00000625094 2161 ntBASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATXN3LQ9H3M9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 AC135279.3-201ENST00000610945 1311 ntBASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ATXN3LQ9H3M9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 AC142381.2-201ENST00000566120 298 ntBASIC24■■□□□ 1.43
ATXN3LQ9H3M9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
ATXN3LQ9H3M9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATXN3LQ9H3M9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 AC024257.2-201ENST00000549699 147 ntBASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATXN3LQ9H3M9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.97■■□□□ 1.43
ATXN3LQ9H3M9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.96■■□□□ 1.43
ATXN3LQ9H3M9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms