Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC005703.6-201ENST00000623265 1329 ntBASIC24.71■■□□□ 1.55
CDH23Q9H251 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDH23Q9H251 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.71■■□□□ 1.55
CDH23Q9H251 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.71■■□□□ 1.55
CDH23Q9H251 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.71■■□□□ 1.55
CDH23Q9H251 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDH23Q9H251 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.71■■□□□ 1.55
CDH23Q9H251 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDH23Q9H251 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CDH23Q9H251 AC006455.2-201ENST00000429931 906 ntBASIC24.7■■□□□ 1.55
CDH23Q9H251 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDH23Q9H251 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDH23Q9H251 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDH23Q9H251 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDH23Q9H251 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.7■■□□□ 1.54
CDH23Q9H251 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.7■■□□□ 1.54
CDH23Q9H251 AC142472.1-201ENST00000612013 1741 ntBASIC24.7■■□□□ 1.54
CDH23Q9H251 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDH23Q9H251 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.69■■□□□ 1.54
CDH23Q9H251 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDH23Q9H251 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDH23Q9H251 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.69■■□□□ 1.54
CDH23Q9H251 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDH23Q9H251 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.69■■□□□ 1.54
CDH23Q9H251 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDH23Q9H251 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDH23Q9H251 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.69■■□□□ 1.54
CDH23Q9H251 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDH23Q9H251 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.68■■□□□ 1.54
CDH23Q9H251 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDH23Q9H251 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.68■■□□□ 1.54
CDH23Q9H251 AL358852.1-201ENST00000623174 1268 ntBASIC24.68■■□□□ 1.54
CDH23Q9H251 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.67■■□□□ 1.54
CDH23Q9H251 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDH23Q9H251 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDH23Q9H251 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.67■■□□□ 1.54
CDH23Q9H251 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDH23Q9H251 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDH23Q9H251 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDH23Q9H251 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDH23Q9H251 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.66■■□□□ 1.54
CDH23Q9H251 AC006015.1-201ENST00000429970 570 ntBASIC24.66■■□□□ 1.54
CDH23Q9H251 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDH23Q9H251 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.66■■□□□ 1.54
CDH23Q9H251 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.66■■□□□ 1.54
CDH23Q9H251 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.66■■□□□ 1.54
CDH23Q9H251 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDH23Q9H251 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.65■■□□□ 1.54
CDH23Q9H251 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.65■■□□□ 1.54
CDH23Q9H251 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CDH23Q9H251 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.65■■□□□ 1.54
CDH23Q9H251 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.65■■□□□ 1.54
CDH23Q9H251 CCDC92B-201ENST00000575506 885 ntBASIC24.65■■□□□ 1.54
CDH23Q9H251 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.65■■□□□ 1.54
CDH23Q9H251 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDH23Q9H251 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDH23Q9H251 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.64■■□□□ 1.54
CDH23Q9H251 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CDH23Q9H251 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDH23Q9H251 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.64■■□□□ 1.54
CDH23Q9H251 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDH23Q9H251 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.64■■□□□ 1.54
CDH23Q9H251 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.64■■□□□ 1.54
CDH23Q9H251 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.64■■□□□ 1.53
CDH23Q9H251 KRT18P61-201ENST00000585825 1298 ntBASIC24.64■■□□□ 1.53
CDH23Q9H251 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
CDH23Q9H251 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDH23Q9H251 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDH23Q9H251 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.63■■□□□ 1.53
CDH23Q9H251 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.63■■□□□ 1.53
CDH23Q9H251 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.63■■□□□ 1.53
CDH23Q9H251 KRT18P14-201ENST00000534205 1250 ntBASIC24.63■■□□□ 1.53
CDH23Q9H251 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDH23Q9H251 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.63■■□□□ 1.53
CDH23Q9H251 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDH23Q9H251 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDH23Q9H251 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
CDH23Q9H251 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CDH23Q9H251 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.62■■□□□ 1.53
CDH23Q9H251 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDH23Q9H251 ERN1-208ENST00000606895 2068 ntBASIC24.62■■□□□ 1.53
CDH23Q9H251 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CDH23Q9H251 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.62■■□□□ 1.53
CDH23Q9H251 AC092171.4-201ENST00000609130 632 ntBASIC24.62■■□□□ 1.53
CDH23Q9H251 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDH23Q9H251 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDH23Q9H251 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDH23Q9H251 CROCCP5-201ENST00000436658 830 ntBASIC24.61■■□□□ 1.53
CDH23Q9H251 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.61■■□□□ 1.53
CDH23Q9H251 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.61■■□□□ 1.53
CDH23Q9H251 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.61■■□□□ 1.53
CDH23Q9H251 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CDH23Q9H251 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CDH23Q9H251 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDH23Q9H251 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.61■■□□□ 1.53
CDH23Q9H251 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CDH23Q9H251 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CDH23Q9H251 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDH23Q9H251 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms