Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX4Q9H161 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.31■□□□□ 0.68
ALX4Q9H161 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX4Q9H161 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.31■□□□□ 0.68
ALX4Q9H161 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX4Q9H161 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
ALX4Q9H161 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX4Q9H161 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.3■□□□□ 0.68
ALX4Q9H161 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX4Q9H161 AC060814.1-201ENST00000554326 538 ntBASIC19.3■□□□□ 0.68
ALX4Q9H161 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX4Q9H161 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ALX4Q9H161 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX4Q9H161 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALX4Q9H161 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX4Q9H161 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX4Q9H161 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX4Q9H161 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX4Q9H161 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX4Q9H161 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX4Q9H161 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX4Q9H161 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.28■□□□□ 0.68
ALX4Q9H161 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 FOXO3B-201ENST00000395675 1928 ntBASIC19.27■□□□□ 0.68
ALX4Q9H161 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.27■□□□□ 0.68
ALX4Q9H161 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.27■□□□□ 0.68
ALX4Q9H161 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.27■□□□□ 0.68
ALX4Q9H161 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.27■□□□□ 0.68
ALX4Q9H161 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX4Q9H161 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALX4Q9H161 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.26■□□□□ 0.67
ALX4Q9H161 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX4Q9H161 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.25■□□□□ 0.67
ALX4Q9H161 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
ALX4Q9H161 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ALX4Q9H161 AC126177.7-201ENST00000547904 679 ntBASIC19.25■□□□□ 0.67
ALX4Q9H161 AC007375.3-201ENST00000600936 2314 ntBASIC19.25■□□□□ 0.67
ALX4Q9H161 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ALX4Q9H161 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALX4Q9H161 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.25■□□□□ 0.67
ALX4Q9H161 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX4Q9H161 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.24■□□□□ 0.67
ALX4Q9H161 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.24■□□□□ 0.67
ALX4Q9H161 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX4Q9H161 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ALX4Q9H161 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX4Q9H161 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALX4Q9H161 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ALX4Q9H161 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX4Q9H161 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ALX4Q9H161 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms