Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 APTX-203ENST00000379813 1121 ntTSL 5 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AK3P5-201ENST00000432033 519 ntBASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 HSPA8P3-201ENST00000449300 780 ntBASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 MTND2P41-201ENST00000637599 773 ntBASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 CASC19-222ENST00000641321 1173 ntBASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-3Q9BYR6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 TPTE2P3-201ENST00000441562 1189 ntBASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 AGGF1P7-201ENST00000562369 913 ntBASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 AL161912.3-201ENST00000605404 628 ntBASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 AC015813.7-201ENST00000623294 581 ntBASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP3-3Q9BYR6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC13.9□□□□□ -0.19
KRTAP3-3Q9BYR6 AC068338.2-201ENST00000563278 1430 ntBASIC13.9□□□□□ -0.19
KRTAP3-3Q9BYR6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
KRTAP3-3Q9BYR6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
KRTAP3-3Q9BYR6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 GTF3AP6-201ENST00000432585 986 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AL645638.1-201ENST00000440519 361 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 MTND4P30-201ENST00000450281 899 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AC134698.4-201ENST00000523451 826 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 AC107905.1-201ENST00000616204 426 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 TP73-AS1-207ENST00000624167 988 ntBASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC13.89□□□□□ -0.19
KRTAP3-3Q9BYR6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 DSTNP1-201ENST00000419906 465 ntBASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AC023538.1-201ENST00000534576 736 ntBASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AC074051.4-201ENST00000564888 892 ntBASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AC006328.2-201ENST00000623198 397 ntBASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AC012005.2-201ENST00000624333 397 ntBASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KRTAP3-3Q9BYR6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 TFAM-201ENST00000373895 973 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 TPTE2P1-204ENST00000435256 593 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AL139824.2-201ENST00000458731 1095 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 TPT1P8-201ENST00000510120 555 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AL354872.2-201ENST00000607679 466 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC009974.1-201ENST00000608881 455 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 AC106872.6-201ENST00000514228 1346 ntBASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-3Q9BYR6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 RPP40P1-201ENST00000426762 456 ntBASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 RPL23AP68-201ENST00000480924 445 ntBASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC13.86□□□□□ -0.19
KRTAP3-3Q9BYR6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms