Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 AC005703.6-201ENST00000623265 1329 ntBASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSBP3Q9BWW4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 AL161729.1-201ENST00000604104 1402 ntBASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.03■□□□□ 0.64
SSBP3Q9BWW4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSBP3Q9BWW4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSBP3Q9BWW4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSBP3Q9BWW4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.02■□□□□ 0.63
SSBP3Q9BWW4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 AL136116.3-201ENST00000402907 1138 ntBASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSBP3Q9BWW4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19■□□□□ 0.63
SSBP3Q9BWW4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19■□□□□ 0.63
SSBP3Q9BWW4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
SSBP3Q9BWW4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SSBP3Q9BWW4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSBP3Q9BWW4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19■□□□□ 0.63
SSBP3Q9BWW4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 AC138932.3-201ENST00000567634 1902 ntBASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SSBP3Q9BWW4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSBP3Q9BWW4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 AC093323.1-202ENST00000635031 2045 ntBASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSBP3Q9BWW4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms