Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXC2Q99958 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXC2Q99958 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXC2Q99958 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXC2Q99958 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXC2Q99958 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXC2Q99958 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXC2Q99958 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXC2Q99958 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXC2Q99958 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXC2Q99958 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FOXC2Q99958 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.37■□□□□ 0.69
FOXC2Q99958 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXC2Q99958 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXC2Q99958 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXC2Q99958 AC027612.3-201ENST00000413684 1047 ntBASIC19.36■□□□□ 0.69
FOXC2Q99958 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXC2Q99958 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXC2Q99958 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXC2Q99958 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXC2Q99958 AL358852.1-201ENST00000623174 1268 ntBASIC19.36■□□□□ 0.69
FOXC2Q99958 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXC2Q99958 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXC2Q99958 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
FOXC2Q99958 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXC2Q99958 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXC2Q99958 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXC2Q99958 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXC2Q99958 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.35■□□□□ 0.69
FOXC2Q99958 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.35■□□□□ 0.69
FOXC2Q99958 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FOXC2Q99958 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FOXC2Q99958 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXC2Q99958 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXC2Q99958 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXC2Q99958 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXC2Q99958 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXC2Q99958 AC126544.1-201ENST00000580842 1059 ntBASIC19.34■□□□□ 0.69
FOXC2Q99958 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXC2Q99958 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXC2Q99958 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXC2Q99958 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXC2Q99958 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.33■□□□□ 0.68
FOXC2Q99958 HLA-L-209ENST00000420110 1011 ntBASIC19.33■□□□□ 0.68
FOXC2Q99958 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXC2Q99958 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXC2Q99958 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXC2Q99958 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
FOXC2Q99958 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXC2Q99958 C17orf82-201ENST00000623772 1530 ntBASIC19.33■□□□□ 0.68
FOXC2Q99958 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FOXC2Q99958 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXC2Q99958 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXC2Q99958 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXC2Q99958 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXC2Q99958 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXC2Q99958 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXC2Q99958 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXC2Q99958 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXC2Q99958 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FOXC2Q99958 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXC2Q99958 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXC2Q99958 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXC2Q99958 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXC2Q99958 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
FOXC2Q99958 MIR3181-201ENST00000578512 73 ntBASIC19.3■□□□□ 0.68
FOXC2Q99958 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXC2Q99958 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXC2Q99958 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FOXC2Q99958 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXC2Q99958 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 TSPY26P-201ENST00000476365 1326 ntBASIC19.29■□□□□ 0.68
FOXC2Q99958 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXC2Q99958 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXC2Q99958 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXC2Q99958 AC009086.3-201ENST00000623486 1008 ntBASIC19.29■□□□□ 0.68
FOXC2Q99958 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXC2Q99958 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXC2Q99958 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXC2Q99958 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXC2Q99958 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms