Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.11■■□□□ 1.29
SMC6Q96SB8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMC6Q96SB8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.1■■□□□ 1.29
SMC6Q96SB8 RP9P-202ENST00000450133 1212 ntBASIC23.1■■□□□ 1.29
SMC6Q96SB8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC6Q96SB8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMC6Q96SB8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC6Q96SB8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC6Q96SB8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.09■■□□□ 1.29
SMC6Q96SB8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC6Q96SB8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.09■■□□□ 1.29
SMC6Q96SB8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC6Q96SB8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC6Q96SB8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC6Q96SB8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC6Q96SB8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SMC6Q96SB8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 ANOS2P-203ENST00000472227 1816 ntBASIC23.08■■□□□ 1.29
SMC6Q96SB8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC6Q96SB8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC6Q96SB8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC6Q96SB8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
SMC6Q96SB8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC6Q96SB8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMC6Q96SB8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC6Q96SB8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC6Q96SB8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.07■■□□□ 1.28
SMC6Q96SB8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC6Q96SB8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SMC6Q96SB8 KRT18P10-201ENST00000388836 1287 ntBASIC23.07■■□□□ 1.28
SMC6Q96SB8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.07■■□□□ 1.28
SMC6Q96SB8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.07■■□□□ 1.28
SMC6Q96SB8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.06■■□□□ 1.28
SMC6Q96SB8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 AC092296.2-201ENST00000589470 999 ntBASIC23.06■■□□□ 1.28
SMC6Q96SB8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC6Q96SB8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SMC6Q96SB8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMC6Q96SB8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 AC093536.1-201ENST00000569153 554 ntBASIC23.05■■□□□ 1.28
SMC6Q96SB8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
SMC6Q96SB8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
SMC6Q96SB8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC6Q96SB8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SMC6Q96SB8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.04■■□□□ 1.28
SMC6Q96SB8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SMC6Q96SB8 EP400NL-214ENST00000641289 2402 ntBASIC23.04■■□□□ 1.28
SMC6Q96SB8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.04■■□□□ 1.28
SMC6Q96SB8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC6Q96SB8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC6Q96SB8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC6Q96SB8 GPX1-201ENST00000419349 1106 ntBASIC23.03■■□□□ 1.28
SMC6Q96SB8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC6Q96SB8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMC6Q96SB8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SMC6Q96SB8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC6Q96SB8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC6Q96SB8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMC6Q96SB8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.02■■□□□ 1.28
SMC6Q96SB8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC6Q96SB8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMC6Q96SB8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC6Q96SB8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SMC6Q96SB8 ECEL1P2-201ENST00000461596 1295 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms