Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CASD1Q96PB1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CASD1Q96PB1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CASD1Q96PB1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CASD1Q96PB1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CASD1Q96PB1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CASD1Q96PB1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.71■■□□□ 1.55
CASD1Q96PB1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.71■■□□□ 1.55
CASD1Q96PB1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CASD1Q96PB1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CASD1Q96PB1 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.7■■□□□ 1.54
CASD1Q96PB1 AC091305.1-201ENST00000479476 895 ntBASIC24.7■■□□□ 1.54
CASD1Q96PB1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.7■■□□□ 1.54
CASD1Q96PB1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CASD1Q96PB1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CASD1Q96PB1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CASD1Q96PB1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.69■■□□□ 1.54
CASD1Q96PB1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CASD1Q96PB1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.69■■□□□ 1.54
CASD1Q96PB1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.69■■□□□ 1.54
CASD1Q96PB1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.69■■□□□ 1.54
CASD1Q96PB1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASD1Q96PB1 C17orf82-201ENST00000623772 1530 ntBASIC24.68■■□□□ 1.54
CASD1Q96PB1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASD1Q96PB1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.68■■□□□ 1.54
CASD1Q96PB1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CASD1Q96PB1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASD1Q96PB1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASD1Q96PB1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CASD1Q96PB1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASD1Q96PB1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASD1Q96PB1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.67■■□□□ 1.54
CASD1Q96PB1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.67■■□□□ 1.54
CASD1Q96PB1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CASD1Q96PB1 AL138724.1-201ENST00000606771 1088 ntBASIC24.67■■□□□ 1.54
CASD1Q96PB1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASD1Q96PB1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.67■■□□□ 1.54
CASD1Q96PB1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.67■■□□□ 1.54
CASD1Q96PB1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.66■■□□□ 1.54
CASD1Q96PB1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 AC011298.3-201ENST00000615796 283 ntBASIC24.66■■□□□ 1.54
CASD1Q96PB1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.66■■□□□ 1.54
CASD1Q96PB1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CASD1Q96PB1 CA15P2-201ENST00000611168 834 ntBASIC24.65■■□□□ 1.54
CASD1Q96PB1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CASD1Q96PB1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.64■■□□□ 1.53
CASD1Q96PB1 RASA4CP-201ENST00000424092 1398 ntBASIC24.64■■□□□ 1.53
CASD1Q96PB1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CASD1Q96PB1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CASD1Q96PB1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CASD1Q96PB1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CASD1Q96PB1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.64■■□□□ 1.53
CASD1Q96PB1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CASD1Q96PB1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
CASD1Q96PB1 AC092666.2-201ENST00000613287 246 ntBASIC24.63■■□□□ 1.53
CASD1Q96PB1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CASD1Q96PB1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASD1Q96PB1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASD1Q96PB1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.62■■□□□ 1.53
CASD1Q96PB1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.62■■□□□ 1.53
CASD1Q96PB1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
CASD1Q96PB1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.62■■□□□ 1.53
CASD1Q96PB1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASD1Q96PB1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASD1Q96PB1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASD1Q96PB1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASD1Q96PB1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASD1Q96PB1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASD1Q96PB1 AC006455.2-201ENST00000429931 906 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 AC027682.1-201ENST00000562846 899 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 MIR5787-201ENST00000611784 55 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 AC241377.3-202ENST00000626088 1088 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 AC241585.3-202ENST00000628937 1088 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 AC245100.8-202ENST00000629247 1058 ntBASIC24.61■■□□□ 1.53
CASD1Q96PB1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.61■■□□□ 1.53
CASD1Q96PB1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 HLA-L-211ENST00000482052 1765 ntBASIC24.6■■□□□ 1.53
CASD1Q96PB1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CASD1Q96PB1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms