Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LINC00479Q96M42 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00479Q96M42 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00479Q96M42 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00479Q96M42 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00479Q96M42 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
LINC00479Q96M42 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00479Q96M42 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 GUSBP5-202ENST00000510805 1989 ntBASIC17.43■□□□□ 0.38
LINC00479Q96M42 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00479Q96M42 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.43■□□□□ 0.38
LINC00479Q96M42 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
LINC00479Q96M42 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 LINC00526-201ENST00000581067 1875 ntBASIC17.43■□□□□ 0.38
LINC00479Q96M42 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00479Q96M42 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00479Q96M42 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC00479Q96M42 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LINC00479Q96M42 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00479Q96M42 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC00479Q96M42 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00479Q96M42 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00479Q96M42 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC00479Q96M42 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00479Q96M42 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC00479Q96M42 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LINC00479Q96M42 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC00479Q96M42 AC060814.1-201ENST00000554326 538 ntBASIC17.41■□□□□ 0.38
LINC00479Q96M42 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00479Q96M42 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LINC00479Q96M42 AC092068.2-201ENST00000590491 1708 ntBASIC17.41■□□□□ 0.38
LINC00479Q96M42 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00479Q96M42 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00479Q96M42 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00479Q96M42 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00479Q96M42 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LINC00479Q96M42 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00479Q96M42 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.39■□□□□ 0.37
LINC00479Q96M42 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00479Q96M42 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 MIR3648-2-201ENST00000581792 180 ntBASIC17.39■□□□□ 0.37
LINC00479Q96M42 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC00479Q96M42 MIR3648-1-201ENST00000615959 180 ntBASIC17.39■□□□□ 0.37
LINC00479Q96M42 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LINC00479Q96M42 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00479Q96M42 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00479Q96M42 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00479Q96M42 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC00479Q96M42 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00479Q96M42 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00479Q96M42 AC007375.3-201ENST00000600936 2314 ntBASIC17.38■□□□□ 0.37
LINC00479Q96M42 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00479Q96M42 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00479Q96M42 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00479Q96M42 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00479Q96M42 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00479Q96M42 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LINC00479Q96M42 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00479Q96M42 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC00479Q96M42 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms