Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF3Q92576 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.71■□□□□ 0.91
PHF3Q92576 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PHF3Q92576 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHF3Q92576 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHF3Q92576 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.7■□□□□ 0.9
PHF3Q92576 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.7■□□□□ 0.9
PHF3Q92576 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF3Q92576 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHF3Q92576 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
PHF3Q92576 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF3Q92576 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHF3Q92576 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF3Q92576 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHF3Q92576 AC133561.4-201ENST00000566112 224 ntBASIC20.68■□□□□ 0.9
PHF3Q92576 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.68■□□□□ 0.9
PHF3Q92576 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
PHF3Q92576 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF3Q92576 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF3Q92576 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHF3Q92576 MIR6722-201ENST00000617286 78 ntBASIC20.68■□□□□ 0.9
PHF3Q92576 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF3Q92576 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.67■□□□□ 0.9
PHF3Q92576 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHF3Q92576 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.67■□□□□ 0.9
PHF3Q92576 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF3Q92576 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF3Q92576 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.66■□□□□ 0.9
PHF3Q92576 AC106739.1-201ENST00000617035 715 ntBASIC20.66■□□□□ 0.9
PHF3Q92576 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF3Q92576 AL139125.2-201ENST00000623134 1869 ntBASIC20.66■□□□□ 0.9
PHF3Q92576 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF3Q92576 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF3Q92576 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF3Q92576 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF3Q92576 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PHF3Q92576 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
PHF3Q92576 AP003733.4-201ENST00000623785 1697 ntBASIC20.66■□□□□ 0.9
PHF3Q92576 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF3Q92576 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF3Q92576 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF3Q92576 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.64■□□□□ 0.9
PHF3Q92576 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.64■□□□□ 0.9
PHF3Q92576 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHF3Q92576 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF3Q92576 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.63■□□□□ 0.89
PHF3Q92576 LINC01124-201ENST00000409786 2117 ntBASIC20.63■□□□□ 0.89
PHF3Q92576 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF3Q92576 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PHF3Q92576 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PHF3Q92576 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF3Q92576 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF3Q92576 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.63■□□□□ 0.89
PHF3Q92576 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHF3Q92576 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.63■□□□□ 0.89
PHF3Q92576 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF3Q92576 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF3Q92576 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.62■□□□□ 0.89
PHF3Q92576 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.61■□□□□ 0.89
PHF3Q92576 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.61■□□□□ 0.89
PHF3Q92576 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
PHF3Q92576 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PHF3Q92576 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHF3Q92576 LINC00543-201ENST00000567234 1845 ntBASIC20.6■□□□□ 0.89
PHF3Q92576 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.6■□□□□ 0.89
PHF3Q92576 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.6■□□□□ 0.89
PHF3Q92576 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.6■□□□□ 0.89
PHF3Q92576 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHF3Q92576 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.6■□□□□ 0.89
PHF3Q92576 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.6■□□□□ 0.89
PHF3Q92576 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF3Q92576 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF3Q92576 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF3Q92576 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF3Q92576 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF3Q92576 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF3Q92576 AC005837.3-201ENST00000612163 286 ntBASIC20.59■□□□□ 0.89
PHF3Q92576 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PHF3Q92576 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF3Q92576 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.59■□□□□ 0.89
PHF3Q92576 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF3Q92576 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PHF3Q92576 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms