Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 FP325331.1-202ENST00000623531 1380 ntBASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 AC126544.1-201ENST00000580842 1059 ntBASIC9.6□□□□□ -0.87
SYNE2Q8WXH0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 ABHD17AP6-201ENST00000458502 1044 ntBASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC9.59□□□□□ -0.87
SYNE2Q8WXH0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 LINC02228-203ENST00000641970 1355 ntBASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 COX20-201ENST00000366528 568 ntTSL 2 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 AL354811.1-201ENST00000610286 706 ntBASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SYNE2Q8WXH0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 AC131274.2-201ENST00000580697 1507 ntBASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SYNE2Q8WXH0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 UNC93B5-201ENST00000530315 699 ntBASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 AC011767.1-201ENST00000617410 1153 ntBASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC9.56□□□□□ -0.88
SYNE2Q8WXH0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms