Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 AC019171.1-201ENST00000601251 1056 ntBASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 AL161729.1-201ENST00000604104 1402 ntBASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCHCR1Q8TD31 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CCHCR1Q8TD31 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.74■■□□□ 1.39
CCHCR1Q8TD31 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCHCR1Q8TD31 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCHCR1Q8TD31 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCHCR1Q8TD31 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCHCR1Q8TD31 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CCHCR1Q8TD31 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 AC090877.2-201ENST00000558441 1738 ntBASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCHCR1Q8TD31 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCHCR1Q8TD31 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCHCR1Q8TD31 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCHCR1Q8TD31 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCHCR1Q8TD31 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.68■■□□□ 1.38
CCHCR1Q8TD31 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCHCR1Q8TD31 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCHCR1Q8TD31 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.68■■□□□ 1.38
CCHCR1Q8TD31 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCHCR1Q8TD31 AL592295.1-201ENST00000400984 884 ntBASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 PVT1_1.1-201ENST00000615125 194 ntBASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCHCR1Q8TD31 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 AC022616.5-201ENST00000518796 181 ntBASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCHCR1Q8TD31 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCHCR1Q8TD31 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCHCR1Q8TD31 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCHCR1Q8TD31 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms