Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.92■□□□□ 0.78
LINC01560Q8TB33 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01560Q8TB33 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01560Q8TB33 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 AC091060.1-201ENST00000623524 1766 ntBASIC19.9■□□□□ 0.78
LINC01560Q8TB33 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 AC091305.1-201ENST00000479476 895 ntBASIC19.9■□□□□ 0.78
LINC01560Q8TB33 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 MIR5787-201ENST00000611784 55 ntBASIC19.9■□□□□ 0.78
LINC01560Q8TB33 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LINC01560Q8TB33 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 AC008764.7-201ENST00000593779 1081 ntBASIC19.89■□□□□ 0.77
LINC01560Q8TB33 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01560Q8TB33 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 CA15P2-201ENST00000611168 834 ntBASIC19.88■□□□□ 0.77
LINC01560Q8TB33 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LINC01560Q8TB33 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01560Q8TB33 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 RASA4CP-201ENST00000424092 1398 ntBASIC19.86■□□□□ 0.77
LINC01560Q8TB33 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 AC145676.1-201ENST00000514988 2004 ntBASIC19.86■□□□□ 0.77
LINC01560Q8TB33 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01560Q8TB33 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 C17orf82-201ENST00000623772 1530 ntBASIC19.85■□□□□ 0.77
LINC01560Q8TB33 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01560Q8TB33 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01560Q8TB33 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01560Q8TB33 AL138724.1-201ENST00000606771 1088 ntBASIC19.84■□□□□ 0.77
LINC01560Q8TB33 AC011298.3-201ENST00000615796 283 ntBASIC19.84■□□□□ 0.77
LINC01560Q8TB33 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.84■□□□□ 0.77
LINC01560Q8TB33 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01560Q8TB33 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms