Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.56□□□□□ -0.08
SVIPQ8NHG7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 AC093503.3-201ENST00000624917 2352 ntBASIC14.55□□□□□ -0.08
SVIPQ8NHG7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 AL117328.2-201ENST00000624617 1940 ntBASIC14.55□□□□□ -0.08
SVIPQ8NHG7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 AL512408.1-201ENST00000569378 2000 ntBASIC14.55□□□□□ -0.08
SVIPQ8NHG7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 AC145098.2-201ENST00000623593 3026 ntBASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SVIPQ8NHG7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SVIPQ8NHG7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 Z98882.1-201ENST00000622160 2253 ntBASIC14.53□□□□□ -0.08
SVIPQ8NHG7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ST7-AS1-201ENST00000456775 1889 ntBASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SVIPQ8NHG7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SVIPQ8NHG7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
SVIPQ8NHG7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 FBXW4P1-201ENST00000426721 2239 ntBASIC14.51□□□□□ -0.09
SVIPQ8NHG7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms