Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.6■■□□□ 1.21
RASGEF1AQ8N9B8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RASGEF1AQ8N9B8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 AC004812.2-201ENST00000611079 2094 ntBASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RASGEF1AQ8N9B8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RASGEF1AQ8N9B8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RASGEF1AQ8N9B8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RASGEF1AQ8N9B8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.58■■□□□ 1.21
RASGEF1AQ8N9B8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
RASGEF1AQ8N9B8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
RASGEF1AQ8N9B8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
RASGEF1AQ8N9B8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 MIR6724-1-201ENST00000616420 92 ntBASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 MIR6724-2-201ENST00000616483 92 ntBASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 MIR6724-4-201ENST00000617390 92 ntBASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 MIR6724-3-201ENST00000622482 92 ntBASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RASGEF1AQ8N9B8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RASGEF1AQ8N9B8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 ALDH1A3-203ENST00000557963 1670 ntBASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.55■■□□□ 1.2
RASGEF1AQ8N9B8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.54■■□□□ 1.2
RASGEF1AQ8N9B8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.53■■□□□ 1.2
RASGEF1AQ8N9B8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RASGEF1AQ8N9B8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RASGEF1AQ8N9B8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 AC005703.6-201ENST00000623265 1329 ntBASIC22.51■■□□□ 1.19
RASGEF1AQ8N9B8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RASGEF1AQ8N9B8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RASGEF1AQ8N9B8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms