Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39CQ8N584 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39CQ8N584 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39CQ8N584 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 TSPY9P-201ENST00000440215 945 ntBASIC24.39■■□□□ 1.49
TTC39CQ8N584 TSPY11P-201ENST00000442607 1045 ntBASIC24.39■■□□□ 1.49
TTC39CQ8N584 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.39■■□□□ 1.49
TTC39CQ8N584 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.39■■□□□ 1.49
TTC39CQ8N584 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC39CQ8N584 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TTC39CQ8N584 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TTC39CQ8N584 UNC93B8-201ENST00000511903 705 ntBASIC24.38■■□□□ 1.49
TTC39CQ8N584 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.38■■□□□ 1.49
TTC39CQ8N584 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC39CQ8N584 AC005703.6-201ENST00000623265 1329 ntBASIC24.37■■□□□ 1.49
TTC39CQ8N584 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC39CQ8N584 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.37■■□□□ 1.49
TTC39CQ8N584 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC39CQ8N584 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TTC39CQ8N584 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC39CQ8N584 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC39CQ8N584 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC39CQ8N584 AC004812.2-201ENST00000611079 2094 ntBASIC24.36■■□□□ 1.49
TTC39CQ8N584 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.36■■□□□ 1.49
TTC39CQ8N584 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.36■■□□□ 1.49
TTC39CQ8N584 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TTC39CQ8N584 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
TTC39CQ8N584 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.35■■□□□ 1.49
TTC39CQ8N584 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC39CQ8N584 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TTC39CQ8N584 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC39CQ8N584 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TTC39CQ8N584 KRT16P3-201ENST00000439127 1283 ntBASIC24.34■■□□□ 1.49
TTC39CQ8N584 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.34■■□□□ 1.49
TTC39CQ8N584 MIR6724-1-201ENST00000616420 92 ntBASIC24.34■■□□□ 1.49
TTC39CQ8N584 MIR6724-2-201ENST00000616483 92 ntBASIC24.34■■□□□ 1.49
TTC39CQ8N584 MIR6724-4-201ENST00000617390 92 ntBASIC24.34■■□□□ 1.49
TTC39CQ8N584 MIR6724-3-201ENST00000622482 92 ntBASIC24.34■■□□□ 1.49
TTC39CQ8N584 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC39CQ8N584 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.33■■□□□ 1.49
TTC39CQ8N584 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.33■■□□□ 1.49
TTC39CQ8N584 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TTC39CQ8N584 AC093323.1-202ENST00000635031 2045 ntBASIC24.33■■□□□ 1.49
TTC39CQ8N584 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC39CQ8N584 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TTC39CQ8N584 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TTC39CQ8N584 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TTC39CQ8N584 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.32■■□□□ 1.48
TTC39CQ8N584 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.32■■□□□ 1.48
TTC39CQ8N584 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.32■■□□□ 1.48
TTC39CQ8N584 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC39CQ8N584 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC39CQ8N584 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TTC39CQ8N584 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC39CQ8N584 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC39CQ8N584 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.31■■□□□ 1.48
TTC39CQ8N584 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.31■■□□□ 1.48
TTC39CQ8N584 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC39CQ8N584 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TTC39CQ8N584 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TTC39CQ8N584 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.3■■□□□ 1.48
TTC39CQ8N584 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.3■■□□□ 1.48
TTC39CQ8N584 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TTC39CQ8N584 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TTC39CQ8N584 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TTC39CQ8N584 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TTC39CQ8N584 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.29■■□□□ 1.48
TTC39CQ8N584 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TTC39CQ8N584 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC39CQ8N584 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.28■■□□□ 1.48
TTC39CQ8N584 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TTC39CQ8N584 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms