Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 AC022616.5-201ENST00000518796 181 ntBASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC13Q8IYE1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 HLA-L-211ENST00000482052 1765 ntBASIC23.86■■□□□ 1.41
CCDC13Q8IYE1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.85■■□□□ 1.41
CCDC13Q8IYE1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC13Q8IYE1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CCDC13Q8IYE1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC13Q8IYE1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 AC011551.1-201ENST00000614101 683 ntBASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC13Q8IYE1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 ABCB10P4-201ENST00000566803 2184 ntBASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC13Q8IYE1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC13Q8IYE1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC13Q8IYE1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC13Q8IYE1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC13Q8IYE1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC13Q8IYE1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC13Q8IYE1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC13Q8IYE1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC13Q8IYE1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC13Q8IYE1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC13Q8IYE1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CCDC13Q8IYE1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms