Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF135Q8IUD6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF135Q8IUD6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF135Q8IUD6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF135Q8IUD6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RNF135Q8IUD6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 AL137784.2-201ENST00000607332 1000 ntBASIC24.2■■□□□ 1.46
RNF135Q8IUD6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF135Q8IUD6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF135Q8IUD6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 AC008764.7-201ENST00000593779 1081 ntBASIC24.18■■□□□ 1.46
RNF135Q8IUD6 AC092171.4-201ENST00000609130 632 ntBASIC24.18■■□□□ 1.46
RNF135Q8IUD6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RNF135Q8IUD6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 AC135731.1-201ENST00000569415 2548 ntBASIC24.17■■□□□ 1.46
RNF135Q8IUD6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF135Q8IUD6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF135Q8IUD6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 SERBP1P1-201ENST00000396021 1160 ntBASIC24.15■■□□□ 1.46
RNF135Q8IUD6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF135Q8IUD6 AC020928.2-201ENST00000588717 2197 ntBASIC24.15■■□□□ 1.46
RNF135Q8IUD6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF135Q8IUD6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RNF135Q8IUD6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 AC034268.1-201ENST00000441047 882 ntBASIC24.14■■□□□ 1.45
RNF135Q8IUD6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF135Q8IUD6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 AC097639.1-201ENST00000565519 1891 ntBASIC24.13■■□□□ 1.45
RNF135Q8IUD6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF135Q8IUD6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 ID1-201ENST00000376105 1233 ntBASIC24.12■■□□□ 1.45
RNF135Q8IUD6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 AC099791.1-201ENST00000416440 715 ntBASIC24.12■■□□□ 1.45
RNF135Q8IUD6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms