Protein–RNA interactions for Protein: Q6UB35

MTHFD1L, Monofunctional C1-tetrahydrofolate synthase, mitochondrial, humanhuman

Predictions only

Length 978 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1LQ6UB35 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MTHFD1LQ6UB35 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MTHFD1LQ6UB35 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.38■■□□□ 1.65
MTHFD1LQ6UB35 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
MTHFD1LQ6UB35 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
MTHFD1LQ6UB35 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
MTHFD1LQ6UB35 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 AC022211.4-201ENST00000625094 2161 ntBASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.36■■□□□ 1.65
MTHFD1LQ6UB35 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 AL136162.1-201ENST00000607711 1078 ntBASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
MTHFD1LQ6UB35 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 MIR935-201ENST00000401179 91 ntBASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
MTHFD1LQ6UB35 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MTHFD1LQ6UB35 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
MTHFD1LQ6UB35 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 AL161729.1-201ENST00000604104 1402 ntBASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MTHFD1LQ6UB35 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 AC135279.3-201ENST00000610945 1311 ntBASIC25.31■■□□□ 1.64
MTHFD1LQ6UB35 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MTHFD1LQ6UB35 AC009102.2-201ENST00000606772 1639 ntBASIC25.3■■□□□ 1.64
MTHFD1LQ6UB35 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MTHFD1LQ6UB35 AC024257.2-201ENST00000549699 147 ntBASIC25.3■■□□□ 1.64
MTHFD1LQ6UB35 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MTHFD1LQ6UB35 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
MTHFD1LQ6UB35 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MTHFD1LQ6UB35 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.29■■□□□ 1.64
MTHFD1LQ6UB35 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MTHFD1LQ6UB35 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 AL031432.3-201ENST00000607698 485 ntBASIC25.28■■□□□ 1.64
MTHFD1LQ6UB35 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 AP003733.4-201ENST00000623785 1697 ntBASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 DUX4L19-201ENST00000557448 1267 ntBASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
MTHFD1LQ6UB35 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms