Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC092437.1-201ENST00000624794 1048 ntBASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 TSPY26P-201ENST00000476365 1326 ntBASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 YBX1P1-201ENST00000445822 960 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L2-201ENST00000561772 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 MIR3181-201ENST00000578512 73 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L6-201ENST00000626483 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L1-201ENST00000627662 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L8-201ENST00000629013 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L3-201ENST00000630187 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L7-201ENST00000630678 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 DUX4L5-201ENST00000630834 1275 ntBASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS13DQ5THJ4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13DQ5THJ4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 KRT18P61-201ENST00000585825 1298 ntBASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 RARRES2P11-201ENST00000635158 484 ntBASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13DQ5THJ4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13DQ5THJ4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 AC123595.1-201ENST00000440769 1046 ntBASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 AC008764.7-201ENST00000593779 1081 ntBASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS13DQ5THJ4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS13DQ5THJ4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS13DQ5THJ4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms