Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PDS5AQ29RF7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.71■■■□□ 2.03
PDS5AQ29RF7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.71■■■□□ 2.03
PDS5AQ29RF7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
PDS5AQ29RF7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PDS5AQ29RF7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PDS5AQ29RF7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.7■■■□□ 2.02
PDS5AQ29RF7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDS5AQ29RF7 AC106739.1-201ENST00000617035 715 ntBASIC27.69■■■□□ 2.02
PDS5AQ29RF7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PDS5AQ29RF7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
PDS5AQ29RF7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
PDS5AQ29RF7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDS5AQ29RF7 AC009102.2-201ENST00000606772 1639 ntBASIC27.68■■■□□ 2.02
PDS5AQ29RF7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PDS5AQ29RF7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.67■■■□□ 2.02
PDS5AQ29RF7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDS5AQ29RF7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.66■■■□□ 2.02
PDS5AQ29RF7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
PDS5AQ29RF7 ALDH1A3-203ENST00000557963 1670 ntBASIC27.66■■■□□ 2.02
PDS5AQ29RF7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.66■■■□□ 2.02
PDS5AQ29RF7 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.66■■■□□ 2.02
PDS5AQ29RF7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.65■■■□□ 2.02
PDS5AQ29RF7 C17orf82-201ENST00000623772 1530 ntBASIC27.65■■■□□ 2.02
PDS5AQ29RF7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PDS5AQ29RF7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDS5AQ29RF7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDS5AQ29RF7 UNC93B3-201ENST00000308076 687 ntBASIC27.65■■■□□ 2.02
PDS5AQ29RF7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.64■■■□□ 2.02
PDS5AQ29RF7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PDS5AQ29RF7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PDS5AQ29RF7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PDS5AQ29RF7 DUX4L19-201ENST00000557448 1267 ntBASIC27.64■■■□□ 2.01
PDS5AQ29RF7 AC005837.3-201ENST00000612163 286 ntBASIC27.64■■■□□ 2.01
PDS5AQ29RF7 AC138932.3-201ENST00000567634 1902 ntBASIC27.64■■■□□ 2.01
PDS5AQ29RF7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 AC092171.4-201ENST00000609130 632 ntBASIC27.63■■■□□ 2.01
PDS5AQ29RF7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.63■■■□□ 2.01
PDS5AQ29RF7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDS5AQ29RF7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 AL136162.1-201ENST00000607711 1078 ntBASIC27.61■■■□□ 2.01
PDS5AQ29RF7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDS5AQ29RF7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 AC135279.3-201ENST00000610945 1311 ntBASIC27.6■■■□□ 2.01
PDS5AQ29RF7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 AL031432.3-201ENST00000607698 485 ntBASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms