Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GNAS-249ENST00000490374 675 ntTSL 313.27□□□□□ -0.291e-7■■■■□ 21.3
SRSF1Q07955 GNAS-206ENST00000349036 581 ntTSL 513.23□□□□□ -0.291e-7■■■■□ 21.3
SRSF1Q07955 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.378e-7■■■■□ 21.3
SRSF1Q07955 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.66□□□□□ -0.388e-7■■■■□ 21.3
SRSF1Q07955 RECQL5-206ENST00000578201 1972 ntTSL 512.64□□□□□ -0.398e-7■■■■□ 21.3
SRSF1Q07955 GNAS-247ENST00000488546 897 ntTSL 512.52□□□□□ -0.411e-7■■■■□ 21.3
SRSF1Q07955 ACD-207ENST00000602622 2526 ntTSL 212.39□□□□□ -0.438e-7■■■■□ 21.3
SRSF1Q07955 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.09□□□□□ -0.478e-7■■■■□ 21.3
SRSF1Q07955 GNAS-219ENST00000453292 632 ntTSL 512.02□□□□□ -0.491e-7■■■■□ 21.3
SRSF1Q07955 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.498e-7■■■■□ 21.3
SRSF1Q07955 GNAS-239ENST00000481039 756 ntTSL 511.73□□□□□ -0.531e-7■■■■□ 21.3
SRSF1Q07955 ACLY-209ENST00000590770 583 ntTSL 411.71□□□□□ -0.533e-9■■■■□ 21.3
SRSF1Q07955 GNAS-217ENST00000423897 736 ntTSL 311.41□□□□□ -0.581e-7■■■■□ 21.3
SRSF1Q07955 GNAS-252ENST00000493744 812 ntTSL 211.41□□□□□ -0.581e-7■■■■□ 21.3
SRSF1Q07955 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.628e-7■■■■□ 21.3
SRSF1Q07955 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.638e-7■■■■□ 21.3
SRSF1Q07955 SART3-208ENST00000547528 1935 ntTSL 1 (best)10.99□□□□□ -0.658e-7■■■■□ 21.3
SRSF1Q07955 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.83□□□□□ -0.681e-7■■■■□ 21.3
SRSF1Q07955 GNAS-222ENST00000464624 3764 ntTSL 510.78□□□□□ -0.681e-7■■■■□ 21.3
SRSF1Q07955 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.64□□□□□ -0.718e-7■■■■□ 21.3
SRSF1Q07955 GNAS-218ENST00000450130 595 ntTSL 510.25□□□□□ -0.771e-7■■■■□ 21.3
SRSF1Q07955 GNAS-216ENST00000419558 729 ntTSL 310.1□□□□□ -0.791e-7■■■■□ 21.3
SRSF1Q07955 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.07□□□□□ -0.81e-7■■■■□ 21.3
SRSF1Q07955 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.03□□□□□ -0.88e-7■■■■□ 21.3
SRSF1Q07955 ACLY-210ENST00000592970 540 ntTSL 410□□□□□ -0.813e-9■■■■□ 21.3
SRSF1Q07955 SART3-206ENST00000546815 2318 ntTSL 59.74□□□□□ -0.858e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-209ENST00000487700 472 ntTSL 39.48□□□□□ -0.898e-7■■■■□ 21.3
SRSF1Q07955 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC9.47□□□□□ -0.898e-7■■■■□ 21.3
SRSF1Q07955 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC9.43□□□□□ -0.93e-9■■■■□ 21.3
SRSF1Q07955 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.938e-7■■■■□ 21.3
SRSF1Q07955 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.948e-7■■■■□ 21.3
SRSF1Q07955 SART3-202ENST00000431469 2834 ntTSL 1 (best) BASIC8.94□□□□□ -0.988e-7■■■■□ 21.3
SRSF1Q07955 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.993e-9■■■■□ 21.3
SRSF1Q07955 GNAS-227ENST00000468895 583 ntTSL 38.79□□□□□ -11e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-207ENST00000473251 834 ntTSL 38.73□□□□□ -1.018e-7■■■■□ 21.3
SRSF1Q07955 SART3-209ENST00000548077 625 ntTSL 28.71□□□□□ -1.028e-7■■■■□ 21.3
SRSF1Q07955 DPP9-213ENST00000598360 626 ntTSL 48.24□□□□□ -1.098e-7■■■■□ 21.3
SRSF1Q07955 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC8.12□□□□□ -1.111e-7■■■■□ 21.3
SRSF1Q07955 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.138e-7■■■■□ 21.3
SRSF1Q07955 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC7.78□□□□□ -1.161e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-211ENST00000493032 627 ntTSL 37.27□□□□□ -1.258e-7■■■■□ 21.3
SRSF1Q07955 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.253e-9■■■■□ 21.3
SRSF1Q07955 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.273e-9■■■■□ 21.3
SRSF1Q07955 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.333e-9■■■■□ 21.3
SRSF1Q07955 SART3-204ENST00000546728 3637 ntTSL 1 (best)6.7□□□□□ -1.348e-7■■■■□ 21.3
SRSF1Q07955 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC6.56□□□□□ -1.368e-7■■■■□ 21.3
SRSF1Q07955 GNAS-225ENST00000467227 543 ntTSL 36.51□□□□□ -1.371e-7■■■■□ 21.3
SRSF1Q07955 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.18□□□□□ -1.421e-6■■■■□ 21.3
SRSF1Q07955 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.621e-6■■■■□ 21.3
SRSF1Q07955 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71e-6■■■■□ 21.3
SRSF1Q07955 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.742e-8■■■■□ 21.3
SRSF1Q07955 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.19□□□□□ -1.741e-6■■■■□ 21.3
SRSF1Q07955 YWHAQ-204ENST00000460093 345 ntTSL 23.84□□□□□ -1.798e-7■■■■□ 21.3
SRSF1Q07955 TRPM4-210ENST00000598691 594 ntTSL 519.45■□□□□ 0.75e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-211ENST00000598697 3349 ntTSL 212.21□□□□□ -0.455e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-209ENST00000598502 3695 ntTSL 1 (best)12.03□□□□□ -0.485e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-205ENST00000595519 3702 ntTSL 1 (best)11.53□□□□□ -0.565e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-207ENST00000596338 3993 ntTSL 211.36□□□□□ -0.595e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.715e-6■■■■□ 21.3
SRSF1Q07955 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.23□□□□□ -0.775e-6■■■■□ 21.3
SRSF1Q07955 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.643e-6■■■■□ 21.3
SRSF1Q07955 INO80B-206ENST00000469849 689 ntTSL 528.6■■■□□ 2.176e-6■■■■□ 21.2
SRSF1Q07955 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.6■■■□□ 2.176e-6■■■■□ 21.2
SRSF1Q07955 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.176e-6■■■■□ 21.2
SRSF1Q07955 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.65■■□□□ 1.226e-6■■■■□ 21.2
SRSF1Q07955 PRMT2-214ENST00000491389 616 ntTSL 222.15■■□□□ 1.146e-6■■■■□ 21.2
SRSF1Q07955 PRMT2-215ENST00000498151 493 ntTSL 321.96■■□□□ 1.116e-6■■■■□ 21.2
SRSF1Q07955 RPS6KB1-208ENST00000489824 909 ntTSL 318.95■□□□□ 0.626e-6■■■■□ 21.2
SRSF1Q07955 CYTH2-202ENST00000391881 1546 ntTSL 518.85■□□□□ 0.616e-7■■■■□ 21.2
SRSF1Q07955 RPS6KB1-207ENST00000477179 431 ntTSL 318.63■□□□□ 0.576e-6■■■■□ 21.2
SRSF1Q07955 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.551e-17■■■■□ 21.2
SRSF1Q07955 MAEA-212ENST00000509531 1001 ntTSL 1 (best)18.22■□□□□ 0.516e-6■■■■□ 21.2
SRSF1Q07955 MAEA-206ENST00000503693 1182 ntTSL 1 (best)18.22■□□□□ 0.516e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-204ENST00000542088 1040 ntTSL 317.95■□□□□ 0.464e-11■■■■□ 21.2
SRSF1Q07955 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.466e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-216ENST00000599488 514 ntTSL 417.87■□□□□ 0.456e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-215ENST00000599137 608 ntTSL 417.68■□□□□ 0.426e-6■■■■□ 21.2
SRSF1Q07955 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.42■□□□□ 0.386e-6■■■■□ 21.2
SRSF1Q07955 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.386e-6■■■■□ 21.2
SRSF1Q07955 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.02■□□□□ 0.326e-6■■■■□ 21.2
SRSF1Q07955 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.84■□□□□ 0.296e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-207ENST00000559223 794 ntTSL 216.81■□□□□ 0.286e-6■■■■□ 21.2
SRSF1Q07955 ANKRD13D-207ENST00000506531 1118 ntTSL 516.71■□□□□ 0.276e-6■■■■□ 21.2
SRSF1Q07955 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.51■□□□□ 0.236e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)16.46■□□□□ 0.234e-11■■■■□ 21.2
SRSF1Q07955 MAEA-216ENST00000512308 839 ntTSL 516.37■□□□□ 0.216e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-208ENST00000559405 583 ntTSL 516.31■□□□□ 0.26e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-213ENST00000580731 725 ntTSL 515.86■□□□□ 0.134e-11■■■■□ 21.2
SRSF1Q07955 AKAP8L-204ENST00000594893 1453 ntTSL 215.82■□□□□ 0.126e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-211ENST00000561188 591 ntTSL 215.81■□□□□ 0.126e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-208ENST00000578264 1071 ntTSL 515.64■□□□□ 0.094e-11■■■■□ 21.2
SRSF1Q07955 UQCC1-219ENST00000491125 990 ntTSL 515.63■□□□□ 0.091e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-207ENST00000595136 531 ntTSL 415.46■□□□□ 0.076e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-214ENST00000582407 714 ntTSL 515.44■□□□□ 0.064e-11■■■■□ 21.2
SRSF1Q07955 MAEA-203ENST00000502558 570 ntTSL 215.38■□□□□ 0.056e-6■■■■□ 21.2
SRSF1Q07955 MAEA-211ENST00000509254 598 ntTSL 415.35■□□□□ 0.056e-6■■■■□ 21.2
SRSF1Q07955 CSAD-218ENST00000491654 578 ntTSL 515.29■□□□□ 0.046e-6■■■■□ 21.2
SRSF1Q07955 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.25■□□□□ 0.036e-6■■■■□ 21.2
SRSF1Q07955 MAEA-218ENST00000513301 595 ntTSL 415.2■□□□□ 0.026e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.014e-11■■■■□ 21.2
Retrieved 100 of 14,836 protein–RNA pairs in 228.6 ms