Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 MIR4449-201ENST00000578365 66 ntBASIC19.41■□□□□ 0.7
TMEM50BP56557 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TMEM50BP56557 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM50BP56557 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM50BP56557 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM50BP56557 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM50BP56557 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
TMEM50BP56557 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM50BP56557 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM50BP56557 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM50BP56557 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM50BP56557 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM50BP56557 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM50BP56557 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM50BP56557 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TMEM50BP56557 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM50BP56557 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 AL161729.1-201ENST00000604104 1402 ntBASIC19.39■□□□□ 0.69
TMEM50BP56557 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.39■□□□□ 0.69
TMEM50BP56557 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TMEM50BP56557 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM50BP56557 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM50BP56557 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM50BP56557 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM50BP56557 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM50BP56557 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM50BP56557 SPCS2P3-201ENST00000500401 656 ntBASIC19.37■□□□□ 0.69
TMEM50BP56557 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM50BP56557 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TMEM50BP56557 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM50BP56557 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TMEM50BP56557 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM50BP56557 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.36■□□□□ 0.69
TMEM50BP56557 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TMEM50BP56557 C1orf229-201ENST00000623686 2258 ntBASIC19.36■□□□□ 0.69
TMEM50BP56557 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM50BP56557 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TMEM50BP56557 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM50BP56557 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM50BP56557 EP400NL-214ENST00000641289 2402 ntBASIC19.35■□□□□ 0.69
TMEM50BP56557 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM50BP56557 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM50BP56557 AL592295.1-201ENST00000400984 884 ntBASIC19.35■□□□□ 0.69
TMEM50BP56557 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TMEM50BP56557 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM50BP56557 AC018755.3-202ENST00000596210 929 ntBASIC19.35■□□□□ 0.69
TMEM50BP56557 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TMEM50BP56557 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM50BP56557 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM50BP56557 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM50BP56557 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM50BP56557 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TMEM50BP56557 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TMEM50BP56557 CLDN5-201ENST00000403084 2357 ntBASIC19.34■□□□□ 0.69
TMEM50BP56557 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM50BP56557 AC087393.1-201ENST00000582896 145 ntBASIC19.34■□□□□ 0.69
TMEM50BP56557 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TMEM50BP56557 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM50BP56557 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TMEM50BP56557 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM50BP56557 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM50BP56557 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TMEM50BP56557 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM50BP56557 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM50BP56557 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM50BP56557 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms