Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC1A3P43003 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A3P43003 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 YBX1P4-201ENST00000392794 808 ntBASIC21.01■□□□□ 0.95
SLC1A3P43003 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A3P43003 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A3P43003 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC1A3P43003 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A3P43003 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC1A3P43003 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A3P43003 AL161729.1-201ENST00000604104 1402 ntBASIC21■□□□□ 0.95
SLC1A3P43003 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A3P43003 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC1A3P43003 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A3P43003 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC1A3P43003 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC1A3P43003 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A3P43003 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC1A3P43003 KRT8P33-201ENST00000508125 1423 ntBASIC20.99■□□□□ 0.95
SLC1A3P43003 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A3P43003 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A3P43003 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC1A3P43003 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A3P43003 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SLC1A3P43003 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A3P43003 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A3P43003 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC1A3P43003 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC1A3P43003 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A3P43003 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC1A3P43003 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC1A3P43003 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A3P43003 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A3P43003 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SLC1A3P43003 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A3P43003 MIR4281-201ENST00000580852 62 ntBASIC20.97■□□□□ 0.95
SLC1A3P43003 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC1A3P43003 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A3P43003 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A3P43003 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC1A3P43003 ABCB10P4-201ENST00000566803 2184 ntBASIC20.96■□□□□ 0.95
SLC1A3P43003 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC1A3P43003 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC1A3P43003 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SLC1A3P43003 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC1A3P43003 AL022069.1-201ENST00000568025 1636 ntBASIC20.96■□□□□ 0.95
SLC1A3P43003 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A3P43003 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A3P43003 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC1A3P43003 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A3P43003 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC1A3P43003 AC103724.3-201ENST00000564481 992 ntBASIC20.95■□□□□ 0.94
SLC1A3P43003 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC1A3P43003 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A3P43003 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A3P43003 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
SLC1A3P43003 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC1A3P43003 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC1A3P43003 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A3P43003 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC1A3P43003 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SLC1A3P43003 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A3P43003 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC1A3P43003 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC1A3P43003 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SLC1A3P43003 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A3P43003 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A3P43003 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A3P43003 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A3P43003 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A3P43003 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A3P43003 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SLC1A3P43003 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A3P43003 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A3P43003 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A3P43003 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC1A3P43003 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A3P43003 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC1A3P43003 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC1A3P43003 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC1A3P43003 AF131216.4-201ENST00000638924 1588 ntBASIC20.92■□□□□ 0.94
SLC1A3P43003 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SLC1A3P43003 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A3P43003 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC1A3P43003 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A3P43003 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A3P43003 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 AC131274.2-201ENST00000580697 1507 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms