Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.81■■□□□ 1.08
CCL4P13236 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL4P13236 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL4P13236 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCL4P13236 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.81■■□□□ 1.08
CCL4P13236 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCL4P13236 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
CCL4P13236 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCL4P13236 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.8■■□□□ 1.08
CCL4P13236 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.8■■□□□ 1.08
CCL4P13236 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL4P13236 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL4P13236 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL4P13236 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCL4P13236 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 AC091305.1-201ENST00000479476 895 ntBASIC21.79■■□□□ 1.08
CCL4P13236 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.79■■□□□ 1.08
CCL4P13236 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCL4P13236 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL4P13236 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.78■■□□□ 1.08
CCL4P13236 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCL4P13236 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CCL4P13236 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.78■■□□□ 1.08
CCL4P13236 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCL4P13236 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCL4P13236 AC145676.1-201ENST00000514988 2004 ntBASIC21.77■■□□□ 1.07
CCL4P13236 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.77■■□□□ 1.07
CCL4P13236 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL4P13236 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL4P13236 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCL4P13236 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCL4P13236 CA15P2-201ENST00000611168 834 ntBASIC21.76■■□□□ 1.07
CCL4P13236 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL4P13236 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL4P13236 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.75■■□□□ 1.07
CCL4P13236 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.75■■□□□ 1.07
CCL4P13236 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCL4P13236 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCL4P13236 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCL4P13236 MIR5787-201ENST00000611784 55 ntBASIC21.75■■□□□ 1.07
CCL4P13236 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCL4P13236 C17orf82-201ENST00000623772 1530 ntBASIC21.75■■□□□ 1.07
CCL4P13236 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
CCL4P13236 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
CCL4P13236 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCL4P13236 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.74■■□□□ 1.07
CCL4P13236 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.74■■□□□ 1.07
CCL4P13236 AC008764.7-201ENST00000593779 1081 ntBASIC21.74■■□□□ 1.07
CCL4P13236 RASA4CP-201ENST00000424092 1398 ntBASIC21.74■■□□□ 1.07
CCL4P13236 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCL4P13236 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.73■■□□□ 1.07
CCL4P13236 AC011298.3-201ENST00000615796 283 ntBASIC21.73■■□□□ 1.07
CCL4P13236 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCL4P13236 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCL4P13236 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
CCL4P13236 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.72■■□□□ 1.07
CCL4P13236 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCL4P13236 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCL4P13236 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCL4P13236 AC006455.2-201ENST00000429931 906 ntBASIC21.72■■□□□ 1.07
CCL4P13236 AL138724.1-201ENST00000606771 1088 ntBASIC21.72■■□□□ 1.07
CCL4P13236 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.72■■□□□ 1.07
CCL4P13236 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.72■■□□□ 1.07
CCL4P13236 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCL4P13236 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCL4P13236 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCL4P13236 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCL4P13236 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL4P13236 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL4P13236 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL4P13236 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
CCL4P13236 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL4P13236 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.71■■□□□ 1.07
CCL4P13236 AC027682.1-201ENST00000562846 899 ntBASIC21.71■■□□□ 1.07
CCL4P13236 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL4P13236 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCL4P13236 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCL4P13236 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms