Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 ATG14YBR128C 1035 nt4.49□□□□□ -1.69
RPL40BP0CH09 TPS3YMR261C 3165 nt4.49□□□□□ -1.69
RPL40BP0CH09 SAP4YGL229C 2457 nt4.48□□□□□ -1.69
RPL40BP0CH09 NOP58YOR310C 1536 nt4.48□□□□□ -1.69
RPL40BP0CH09 AUA1YFL010W-A 285 nt4.48□□□□□ -1.69
RPL40BP0CH09 YGL214WYGL214W 486 nt4.48□□□□□ -1.69
RPL40BP0CH09 NAG1YGR031C-A 492 nt4.48□□□□□ -1.69
RPL40BP0CH09 PCL1YNL289W 840 nt4.48□□□□□ -1.69
RPL40BP0CH09 ATG20YDL113C 1923 nt4.48□□□□□ -1.69
RPL40BP0CH09 IRS4YKR019C 1848 nt4.47□□□□□ -1.69
RPL40BP0CH09 MRS3YJL133W 945 nt4.47□□□□□ -1.69
RPL40BP0CH09 ICY2YPL250C 411 nt4.47□□□□□ -1.69
RPL40BP0CH09 BUD14YAR014C 2130 nt4.46□□□□□ -1.69
RPL40BP0CH09 MSS1YMR023C 1581 nt4.46□□□□□ -1.7
RPL40BP0CH09 RFC2YJR068W 1062 nt4.46□□□□□ -1.7
RPL40BP0CH09 UTP11YKL099C 753 nt4.46□□□□□ -1.7
RPL40BP0CH09 TRM10YOL093W 882 nt4.46□□□□□ -1.7
RPL40BP0CH09 ATG26YLR189C 3597 nt4.46□□□□□ -1.7
RPL40BP0CH09 YLR446WYLR446W 1302 nt4.46□□□□□ -1.7
RPL40BP0CH09 RSC6YCR052W 1452 nt4.45□□□□□ -1.7
RPL40BP0CH09 ARH1YDR376W 1482 nt4.45□□□□□ -1.7
RPL40BP0CH09 TFC6YDR362C 2019 nt4.45□□□□□ -1.7
RPL40BP0CH09 AAP1YHR047C 2571 nt4.45□□□□□ -1.7
RPL40BP0CH09 CDC12YHR107C 1224 nt4.45□□□□□ -1.7
RPL40BP0CH09 DAN1YJR150C 897 nt4.45□□□□□ -1.7
RPL40BP0CH09 NOC4YPR144C 1659 nt4.45□□□□□ -1.7
RPL40BP0CH09 ELP2YGR200C 2367 nt4.45□□□□□ -1.7
RPL40BP0CH09 YHR182WYHR182W 2358 nt4.45□□□□□ -1.7
RPL40BP0CH09 TDA7YNL176C 1911 nt4.44□□□□□ -1.7
RPL40BP0CH09 TUP1YCR084C 2142 nt4.44□□□□□ -1.7
RPL40BP0CH09 IWR1YDL115C 1062 nt4.44□□□□□ -1.7
RPL40BP0CH09 CPR1YDR155C 489 nt4.44□□□□□ -1.7
RPL40BP0CH09 NMA1YLR328W 1206 nt4.44□□□□□ -1.7
RPL40BP0CH09 RSF1YMR030W 1131 nt4.44□□□□□ -1.7
RPL40BP0CH09 MET16YPR167C 786 nt4.44□□□□□ -1.7
RPL40BP0CH09 ADE6YGR061C 4077 nt4.44□□□□□ -1.7
RPL40BP0CH09 NGL2YMR285C 1548 nt4.44□□□□□ -1.7
RPL40BP0CH09 RTC1YOL138C 4026 nt4.44□□□□□ -1.7
RPL40BP0CH09 PUT1YLR142W 1431 nt4.44□□□□□ -1.7
RPL40BP0CH09 HXT4YHR092C 1731 nt4.43□□□□□ -1.7
RPL40BP0CH09 YJL206CYJL206C 2277 nt4.43□□□□□ -1.7
RPL40BP0CH09 THP1YOL072W 1368 nt4.43□□□□□ -1.7
RPL40BP0CH09 APC1YNL172W 5247 nt4.43□□□□□ -1.7
RPL40BP0CH09 YDR250CYDR250C 276 nt4.43□□□□□ -1.7
RPL40BP0CH09 ERD1YDR414C 1089 nt4.43□□□□□ -1.7
RPL40BP0CH09 TYW3YGL050W 822 nt4.43□□□□□ -1.7
RPL40BP0CH09 RPS4BYHR203C 786 nt4.43□□□□□ -1.7
RPL40BP0CH09 YJR096WYJR096W 849 nt4.43□□□□□ -1.7
RPL40BP0CH09 RPS4AYJR145C 786 nt4.43□□□□□ -1.7
RPL40BP0CH09 PDX3YBR035C 687 nt4.43□□□□□ -1.7
RPL40BP0CH09 RET3YPL010W 570 nt4.43□□□□□ -1.7
RPL40BP0CH09 snR17bsnR17b 332 nt4.43□□□□□ -1.7
RPL40BP0CH09 YMD8YML038C 1329 nt4.43□□□□□ -1.7
RPL40BP0CH09 UBA2YDR390C 1911 nt4.42□□□□□ -1.7
RPL40BP0CH09 YTA6YPL074W 2265 nt4.42□□□□□ -1.7
RPL40BP0CH09 TMA17YDL110C 453 nt4.42□□□□□ -1.7
RPL40BP0CH09 YHR212W-AYHR212W-A 204 nt4.42□□□□□ -1.7
RPL40BP0CH09 NIT2YJL126W 924 nt4.42□□□□□ -1.7
RPL40BP0CH09 YAR061WYAR061W 204 nt4.42□□□□□ -1.7
RPL40BP0CH09 MRP21YBL090W 534 nt4.42□□□□□ -1.7
RPL40BP0CH09 CIN5YOR028C 888 nt4.42□□□□□ -1.7
RPL40BP0CH09 RPL21BYPL079W 483 nt4.42□□□□□ -1.7
RPL40BP0CH09 QCR2YPR191W 1107 nt4.42□□□□□ -1.7
RPL40BP0CH09 CDC28YBR160W 897 nt4.42□□□□□ -1.7
RPL40BP0CH09 PAP2YOL115W 1755 nt4.42□□□□□ -1.7
RPL40BP0CH09 AXL2YIL140W 2472 nt4.41□□□□□ -1.7
RPL40BP0CH09 SDA1YGR245C 2304 nt4.41□□□□□ -1.7
RPL40BP0CH09 CLF1YLR117C 2064 nt4.41□□□□□ -1.7
RPL40BP0CH09 ARF2YDL137W 546 nt4.41□□□□□ -1.7
RPL40BP0CH09 SCM3YDL139C 672 nt4.41□□□□□ -1.7
RPL40BP0CH09 YFR035CYFR035C 345 nt4.41□□□□□ -1.7
RPL40BP0CH09 FUM1YPL262W 1467 nt4.41□□□□□ -1.7
RPL40BP0CH09 ASN1YPR145W 1719 nt4.41□□□□□ -1.7
RPL40BP0CH09 RPL12AYEL054C 498 nt4.4□□□□□ -1.71
RPL40BP0CH09 YIL152WYIL152W 708 nt4.4□□□□□ -1.71
RPL40BP0CH09 HLJ1YMR161W 675 nt4.4□□□□□ -1.71
RPL40BP0CH09 NRM1YNR009W 750 nt4.4□□□□□ -1.71
RPL40BP0CH09 EIS1YMR031C 2532 nt4.4□□□□□ -1.71
RPL40BP0CH09 BRE2YLR015W 1518 nt4.4□□□□□ -1.71
RPL40BP0CH09 TFC7YOR110W 1308 nt4.4□□□□□ -1.71
RPL40BP0CH09 SET5YHR207C 1581 nt4.4□□□□□ -1.71
RPL40BP0CH09 NTA1YJR062C 1374 nt4.4□□□□□ -1.71
RPL40BP0CH09 MTR10YOR160W 2919 nt4.39□□□□□ -1.71
RPL40BP0CH09 VPS30YPL120W 1674 nt4.39□□□□□ -1.71
RPL40BP0CH09 AGA1YNR044W 2178 nt4.39□□□□□ -1.71
RPL40BP0CH09 YDR282CYDR282C 1245 nt4.39□□□□□ -1.71
RPL40BP0CH09 YDR445CYDR445C 408 nt4.39□□□□□ -1.71
RPL40BP0CH09 ETT1YOR051C 1239 nt4.39□□□□□ -1.71
RPL40BP0CH09 YPL162CYPL162C 822 nt4.39□□□□□ -1.71
RPL40BP0CH09 ADE4YMR300C 1533 nt4.39□□□□□ -1.71
RPL40BP0CH09 TDA1YMR291W 1761 nt4.39□□□□□ -1.71
RPL40BP0CH09 PRR1YKL116C 1557 nt4.39□□□□□ -1.71
RPL40BP0CH09 UGA2YBR006W 1494 nt4.38□□□□□ -1.71
RPL40BP0CH09 ROT2YBR229C 2865 nt4.38□□□□□ -1.71
RPL40BP0CH09 RPB7YDR404C 516 nt4.38□□□□□ -1.71
RPL40BP0CH09 CKA2YOR061W 1020 nt4.38□□□□□ -1.71
RPL40BP0CH09 UMP1YBR173C 447 nt4.38□□□□□ -1.71
RPL40BP0CH09 DNF2YDR093W 4839 nt4.38□□□□□ -1.71
RPL40BP0CH09 UBX7YBR273C 1311 nt4.38□□□□□ -1.71
RPL40BP0CH09 TAH18YPR048W 1872 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms