Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 ATG14YBR128C 1035 nt4.49□□□□□ -1.69
RPL40AP0CH08 TPS3YMR261C 3165 nt4.49□□□□□ -1.69
RPL40AP0CH08 SAP4YGL229C 2457 nt4.48□□□□□ -1.69
RPL40AP0CH08 NOP58YOR310C 1536 nt4.48□□□□□ -1.69
RPL40AP0CH08 AUA1YFL010W-A 285 nt4.48□□□□□ -1.69
RPL40AP0CH08 YGL214WYGL214W 486 nt4.48□□□□□ -1.69
RPL40AP0CH08 NAG1YGR031C-A 492 nt4.48□□□□□ -1.69
RPL40AP0CH08 PCL1YNL289W 840 nt4.48□□□□□ -1.69
RPL40AP0CH08 ATG20YDL113C 1923 nt4.48□□□□□ -1.69
RPL40AP0CH08 IRS4YKR019C 1848 nt4.47□□□□□ -1.69
RPL40AP0CH08 MRS3YJL133W 945 nt4.47□□□□□ -1.69
RPL40AP0CH08 ICY2YPL250C 411 nt4.47□□□□□ -1.69
RPL40AP0CH08 BUD14YAR014C 2130 nt4.46□□□□□ -1.69
RPL40AP0CH08 MSS1YMR023C 1581 nt4.46□□□□□ -1.7
RPL40AP0CH08 RFC2YJR068W 1062 nt4.46□□□□□ -1.7
RPL40AP0CH08 UTP11YKL099C 753 nt4.46□□□□□ -1.7
RPL40AP0CH08 TRM10YOL093W 882 nt4.46□□□□□ -1.7
RPL40AP0CH08 ATG26YLR189C 3597 nt4.46□□□□□ -1.7
RPL40AP0CH08 YLR446WYLR446W 1302 nt4.46□□□□□ -1.7
RPL40AP0CH08 RSC6YCR052W 1452 nt4.45□□□□□ -1.7
RPL40AP0CH08 ARH1YDR376W 1482 nt4.45□□□□□ -1.7
RPL40AP0CH08 TFC6YDR362C 2019 nt4.45□□□□□ -1.7
RPL40AP0CH08 AAP1YHR047C 2571 nt4.45□□□□□ -1.7
RPL40AP0CH08 CDC12YHR107C 1224 nt4.45□□□□□ -1.7
RPL40AP0CH08 DAN1YJR150C 897 nt4.45□□□□□ -1.7
RPL40AP0CH08 NOC4YPR144C 1659 nt4.45□□□□□ -1.7
RPL40AP0CH08 ELP2YGR200C 2367 nt4.45□□□□□ -1.7
RPL40AP0CH08 YHR182WYHR182W 2358 nt4.45□□□□□ -1.7
RPL40AP0CH08 TDA7YNL176C 1911 nt4.44□□□□□ -1.7
RPL40AP0CH08 TUP1YCR084C 2142 nt4.44□□□□□ -1.7
RPL40AP0CH08 IWR1YDL115C 1062 nt4.44□□□□□ -1.7
RPL40AP0CH08 CPR1YDR155C 489 nt4.44□□□□□ -1.7
RPL40AP0CH08 NMA1YLR328W 1206 nt4.44□□□□□ -1.7
RPL40AP0CH08 RSF1YMR030W 1131 nt4.44□□□□□ -1.7
RPL40AP0CH08 MET16YPR167C 786 nt4.44□□□□□ -1.7
RPL40AP0CH08 ADE6YGR061C 4077 nt4.44□□□□□ -1.7
RPL40AP0CH08 NGL2YMR285C 1548 nt4.44□□□□□ -1.7
RPL40AP0CH08 RTC1YOL138C 4026 nt4.44□□□□□ -1.7
RPL40AP0CH08 PUT1YLR142W 1431 nt4.44□□□□□ -1.7
RPL40AP0CH08 HXT4YHR092C 1731 nt4.43□□□□□ -1.7
RPL40AP0CH08 YJL206CYJL206C 2277 nt4.43□□□□□ -1.7
RPL40AP0CH08 THP1YOL072W 1368 nt4.43□□□□□ -1.7
RPL40AP0CH08 APC1YNL172W 5247 nt4.43□□□□□ -1.7
RPL40AP0CH08 YDR250CYDR250C 276 nt4.43□□□□□ -1.7
RPL40AP0CH08 ERD1YDR414C 1089 nt4.43□□□□□ -1.7
RPL40AP0CH08 TYW3YGL050W 822 nt4.43□□□□□ -1.7
RPL40AP0CH08 RPS4BYHR203C 786 nt4.43□□□□□ -1.7
RPL40AP0CH08 YJR096WYJR096W 849 nt4.43□□□□□ -1.7
RPL40AP0CH08 RPS4AYJR145C 786 nt4.43□□□□□ -1.7
RPL40AP0CH08 PDX3YBR035C 687 nt4.43□□□□□ -1.7
RPL40AP0CH08 RET3YPL010W 570 nt4.43□□□□□ -1.7
RPL40AP0CH08 snR17bsnR17b 332 nt4.43□□□□□ -1.7
RPL40AP0CH08 YMD8YML038C 1329 nt4.43□□□□□ -1.7
RPL40AP0CH08 UBA2YDR390C 1911 nt4.42□□□□□ -1.7
RPL40AP0CH08 YTA6YPL074W 2265 nt4.42□□□□□ -1.7
RPL40AP0CH08 TMA17YDL110C 453 nt4.42□□□□□ -1.7
RPL40AP0CH08 YHR212W-AYHR212W-A 204 nt4.42□□□□□ -1.7
RPL40AP0CH08 NIT2YJL126W 924 nt4.42□□□□□ -1.7
RPL40AP0CH08 YAR061WYAR061W 204 nt4.42□□□□□ -1.7
RPL40AP0CH08 MRP21YBL090W 534 nt4.42□□□□□ -1.7
RPL40AP0CH08 CIN5YOR028C 888 nt4.42□□□□□ -1.7
RPL40AP0CH08 RPL21BYPL079W 483 nt4.42□□□□□ -1.7
RPL40AP0CH08 QCR2YPR191W 1107 nt4.42□□□□□ -1.7
RPL40AP0CH08 CDC28YBR160W 897 nt4.42□□□□□ -1.7
RPL40AP0CH08 PAP2YOL115W 1755 nt4.42□□□□□ -1.7
RPL40AP0CH08 AXL2YIL140W 2472 nt4.41□□□□□ -1.7
RPL40AP0CH08 SDA1YGR245C 2304 nt4.41□□□□□ -1.7
RPL40AP0CH08 CLF1YLR117C 2064 nt4.41□□□□□ -1.7
RPL40AP0CH08 ARF2YDL137W 546 nt4.41□□□□□ -1.7
RPL40AP0CH08 SCM3YDL139C 672 nt4.41□□□□□ -1.7
RPL40AP0CH08 YFR035CYFR035C 345 nt4.41□□□□□ -1.7
RPL40AP0CH08 FUM1YPL262W 1467 nt4.41□□□□□ -1.7
RPL40AP0CH08 ASN1YPR145W 1719 nt4.41□□□□□ -1.7
RPL40AP0CH08 RPL12AYEL054C 498 nt4.4□□□□□ -1.71
RPL40AP0CH08 YIL152WYIL152W 708 nt4.4□□□□□ -1.71
RPL40AP0CH08 HLJ1YMR161W 675 nt4.4□□□□□ -1.71
RPL40AP0CH08 NRM1YNR009W 750 nt4.4□□□□□ -1.71
RPL40AP0CH08 EIS1YMR031C 2532 nt4.4□□□□□ -1.71
RPL40AP0CH08 BRE2YLR015W 1518 nt4.4□□□□□ -1.71
RPL40AP0CH08 TFC7YOR110W 1308 nt4.4□□□□□ -1.71
RPL40AP0CH08 SET5YHR207C 1581 nt4.4□□□□□ -1.71
RPL40AP0CH08 NTA1YJR062C 1374 nt4.4□□□□□ -1.71
RPL40AP0CH08 MTR10YOR160W 2919 nt4.39□□□□□ -1.71
RPL40AP0CH08 VPS30YPL120W 1674 nt4.39□□□□□ -1.71
RPL40AP0CH08 AGA1YNR044W 2178 nt4.39□□□□□ -1.71
RPL40AP0CH08 YDR282CYDR282C 1245 nt4.39□□□□□ -1.71
RPL40AP0CH08 YDR445CYDR445C 408 nt4.39□□□□□ -1.71
RPL40AP0CH08 ETT1YOR051C 1239 nt4.39□□□□□ -1.71
RPL40AP0CH08 YPL162CYPL162C 822 nt4.39□□□□□ -1.71
RPL40AP0CH08 ADE4YMR300C 1533 nt4.39□□□□□ -1.71
RPL40AP0CH08 TDA1YMR291W 1761 nt4.39□□□□□ -1.71
RPL40AP0CH08 PRR1YKL116C 1557 nt4.39□□□□□ -1.71
RPL40AP0CH08 UGA2YBR006W 1494 nt4.38□□□□□ -1.71
RPL40AP0CH08 ROT2YBR229C 2865 nt4.38□□□□□ -1.71
RPL40AP0CH08 RPB7YDR404C 516 nt4.38□□□□□ -1.71
RPL40AP0CH08 CKA2YOR061W 1020 nt4.38□□□□□ -1.71
RPL40AP0CH08 UMP1YBR173C 447 nt4.38□□□□□ -1.71
RPL40AP0CH08 DNF2YDR093W 4839 nt4.38□□□□□ -1.71
RPL40AP0CH08 UBX7YBR273C 1311 nt4.38□□□□□ -1.71
RPL40AP0CH08 TAH18YPR048W 1872 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms