Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
DHFRP00374 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L13-201ENST00000554103 1267 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L15-201ENST00000611059 1267 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L23-201ENST00000615195 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L24-201ENST00000617576 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L22-201ENST00000618238 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L20-201ENST00000619712 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L21-201ENST00000622058 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L10-201ENST00000622460 1267 ntBASIC19.7■□□□□ 0.74
DHFRP00374 DUX4L25-201ENST00000624915 1269 ntBASIC19.7■□□□□ 0.74
DHFRP00374 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.7■□□□□ 0.74
DHFRP00374 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.7■□□□□ 0.74
DHFRP00374 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DHFRP00374 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.7■□□□□ 0.74
DHFRP00374 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DHFRP00374 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DHFRP00374 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.69■□□□□ 0.74
DHFRP00374 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
DHFRP00374 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.69■□□□□ 0.74
DHFRP00374 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DHFRP00374 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DHFRP00374 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
DHFRP00374 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DHFRP00374 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DHFRP00374 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DHFRP00374 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.68■□□□□ 0.74
DHFRP00374 ZNRF2P2-203ENST00000454624 420 ntBASIC19.68■□□□□ 0.74
DHFRP00374 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.68■□□□□ 0.74
DHFRP00374 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.68■□□□□ 0.74
DHFRP00374 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DHFRP00374 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DHFRP00374 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DHFRP00374 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.67■□□□□ 0.74
DHFRP00374 DUSP8P3-201ENST00000399571 1760 ntBASIC19.67■□□□□ 0.74
DHFRP00374 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.67■□□□□ 0.74
DHFRP00374 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.67■□□□□ 0.74
DHFRP00374 AC008813.1-201ENST00000536597 885 ntBASIC19.67■□□□□ 0.74
DHFRP00374 DUX4L11-201ENST00000611504 1267 ntBASIC19.67■□□□□ 0.74
DHFRP00374 DUX4L12-201ENST00000614593 1267 ntBASIC19.67■□□□□ 0.74
DHFRP00374 MIR6089-201ENST00000616698 64 ntBASIC19.67■□□□□ 0.74
DHFRP00374 DUX4L14-201ENST00000621227 1267 ntBASIC19.67■□□□□ 0.74
DHFRP00374 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DHFRP00374 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
DHFRP00374 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DHFRP00374 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DHFRP00374 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DHFRP00374 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.66■□□□□ 0.74
DHFRP00374 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.66■□□□□ 0.74
DHFRP00374 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DHFRP00374 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.65■□□□□ 0.74
DHFRP00374 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DHFRP00374 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.65■□□□□ 0.74
DHFRP00374 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DHFRP00374 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
DHFRP00374 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.65■□□□□ 0.74
DHFRP00374 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DHFRP00374 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DHFRP00374 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms