Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.63■■□□□ 1.05
RRP8O43159 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.63■■□□□ 1.05
RRP8O43159 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RRP8O43159 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.62■■□□□ 1.05
RRP8O43159 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.62■■□□□ 1.05
RRP8O43159 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RRP8O43159 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.62■■□□□ 1.05
RRP8O43159 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.62■■□□□ 1.05
RRP8O43159 AC092437.1-201ENST00000624794 1048 ntBASIC21.62■■□□□ 1.05
RRP8O43159 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RRP8O43159 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RRP8O43159 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RRP8O43159 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RRP8O43159 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RRP8O43159 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.61■■□□□ 1.05
RRP8O43159 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RRP8O43159 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
RRP8O43159 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RRP8O43159 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RRP8O43159 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.6■■□□□ 1.05
RRP8O43159 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.6■■□□□ 1.05
RRP8O43159 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RRP8O43159 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RRP8O43159 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RRP8O43159 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RRP8O43159 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RRP8O43159 AC126544.1-201ENST00000580842 1059 ntBASIC21.59■■□□□ 1.05
RRP8O43159 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RRP8O43159 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.58■■□□□ 1.05
RRP8O43159 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.58■■□□□ 1.05
RRP8O43159 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.58■■□□□ 1.05
RRP8O43159 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RRP8O43159 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.58■■□□□ 1.04
RRP8O43159 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RRP8O43159 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.57■■□□□ 1.04
RRP8O43159 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.57■■□□□ 1.04
RRP8O43159 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RRP8O43159 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.57■■□□□ 1.04
RRP8O43159 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.57■■□□□ 1.04
RRP8O43159 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.57■■□□□ 1.04
RRP8O43159 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.57■■□□□ 1.04
RRP8O43159 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RRP8O43159 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.56■■□□□ 1.04
RRP8O43159 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RRP8O43159 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RRP8O43159 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RRP8O43159 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.56■■□□□ 1.04
RRP8O43159 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RRP8O43159 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RRP8O43159 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RRP8O43159 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.56■■□□□ 1.04
RRP8O43159 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L2-201ENST00000561772 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.56■■□□□ 1.04
RRP8O43159 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.56■■□□□ 1.04
RRP8O43159 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RRP8O43159 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L6-201ENST00000626483 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L1-201ENST00000627662 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L8-201ENST00000629013 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L3-201ENST00000630187 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L7-201ENST00000630678 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 DUX4L5-201ENST00000630834 1275 ntBASIC21.56■■□□□ 1.04
RRP8O43159 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RRP8O43159 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.56■■□□□ 1.04
RRP8O43159 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.55■■□□□ 1.04
RRP8O43159 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.55■■□□□ 1.04
RRP8O43159 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RRP8O43159 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.55■■□□□ 1.04
RRP8O43159 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RRP8O43159 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RRP8O43159 AL031602.1-201ENST00000633169 911 ntBASIC21.55■■□□□ 1.04
RRP8O43159 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.55■■□□□ 1.04
RRP8O43159 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.55■■□□□ 1.04
RRP8O43159 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.55■■□□□ 1.04
RRP8O43159 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 AC009102.2-201ENST00000606772 1639 ntBASIC21.55■■□□□ 1.04
RRP8O43159 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.55■■□□□ 1.04
RRP8O43159 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RRP8O43159 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms