Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.02■■□□□ 1.28
MID1O15344 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MID1O15344 AL136162.1-201ENST00000607711 1078 ntBASIC23.02■■□□□ 1.28
MID1O15344 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.01■■□□□ 1.27
MID1O15344 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.01■■□□□ 1.27
MID1O15344 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.01■■□□□ 1.27
MID1O15344 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MID1O15344 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
MID1O15344 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MID1O15344 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
MID1O15344 AC022211.4-201ENST00000625094 2161 ntBASIC23■■□□□ 1.27
MID1O15344 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
MID1O15344 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MID1O15344 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.99■■□□□ 1.27
MID1O15344 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.99■■□□□ 1.27
MID1O15344 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.99■■□□□ 1.27
MID1O15344 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
MID1O15344 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MID1O15344 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
MID1O15344 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
MID1O15344 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.99■■□□□ 1.27
MID1O15344 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.99■■□□□ 1.27
MID1O15344 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
MID1O15344 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.99■■□□□ 1.27
MID1O15344 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MID1O15344 AC135279.3-201ENST00000610945 1311 ntBASIC22.99■■□□□ 1.27
MID1O15344 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MID1O15344 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.98■■□□□ 1.27
MID1O15344 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
MID1O15344 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
MID1O15344 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MID1O15344 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
MID1O15344 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.98■■□□□ 1.27
MID1O15344 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MID1O15344 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
MID1O15344 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MID1O15344 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.97■■□□□ 1.27
MID1O15344 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.97■■□□□ 1.27
MID1O15344 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.97■■□□□ 1.27
MID1O15344 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
MID1O15344 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
MID1O15344 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.97■■□□□ 1.27
MID1O15344 AC024257.2-201ENST00000549699 147 ntBASIC22.97■■□□□ 1.27
MID1O15344 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.97■■□□□ 1.27
MID1O15344 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MID1O15344 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MID1O15344 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MID1O15344 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.96■■□□□ 1.27
MID1O15344 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.96■■□□□ 1.27
MID1O15344 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.96■■□□□ 1.27
MID1O15344 AC009102.2-201ENST00000606772 1639 ntBASIC22.96■■□□□ 1.27
MID1O15344 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.96■■□□□ 1.27
MID1O15344 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MID1O15344 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MID1O15344 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MID1O15344 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
MID1O15344 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MID1O15344 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MID1O15344 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
MID1O15344 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
MID1O15344 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MID1O15344 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
MID1O15344 AC142381.2-201ENST00000566120 298 ntBASIC22.94■■□□□ 1.26
MID1O15344 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MID1O15344 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
MID1O15344 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
MID1O15344 AL161729.1-201ENST00000604104 1402 ntBASIC22.93■■□□□ 1.26
MID1O15344 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.26
MID1O15344 AL031432.3-201ENST00000607698 485 ntBASIC22.93■■□□□ 1.26
MID1O15344 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
MID1O15344 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
MID1O15344 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
MID1O15344 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MID1O15344 DUX4L19-201ENST00000557448 1267 ntBASIC22.92■■□□□ 1.26
MID1O15344 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
MID1O15344 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.92■■□□□ 1.26
MID1O15344 SYT6-210ENST00000641643 1587 ntBASIC22.92■■□□□ 1.26
MID1O15344 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
MID1O15344 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
MID1O15344 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MID1O15344 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.91■■□□□ 1.26
MID1O15344 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.91■■□□□ 1.26
MID1O15344 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
MID1O15344 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
MID1O15344 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms