Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD9O15198 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.63■□□□□ 0.89
SMAD9O15198 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SMAD9O15198 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.62■□□□□ 0.89
SMAD9O15198 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.62■□□□□ 0.89
SMAD9O15198 AC092028.1-203ENST00000608262 953 ntBASIC20.62■□□□□ 0.89
SMAD9O15198 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
SMAD9O15198 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD9O15198 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
SMAD9O15198 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.61■□□□□ 0.89
SMAD9O15198 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMAD9O15198 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMAD9O15198 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.61■□□□□ 0.89
SMAD9O15198 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD9O15198 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD9O15198 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD9O15198 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.6■□□□□ 0.89
SMAD9O15198 SNX5-217ENST00000606557 1087 ntBASIC20.6■□□□□ 0.89
SMAD9O15198 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.6■□□□□ 0.89
SMAD9O15198 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.6■□□□□ 0.89
SMAD9O15198 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD9O15198 AL022069.1-201ENST00000568025 1636 ntBASIC20.6■□□□□ 0.89
SMAD9O15198 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.59■□□□□ 0.89
SMAD9O15198 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SMAD9O15198 LINC01124-201ENST00000409786 2117 ntBASIC20.59■□□□□ 0.89
SMAD9O15198 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMAD9O15198 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.59■□□□□ 0.89
SMAD9O15198 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.59■□□□□ 0.89
SMAD9O15198 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.59■□□□□ 0.89
SMAD9O15198 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMAD9O15198 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD9O15198 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD9O15198 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD9O15198 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD9O15198 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD9O15198 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD9O15198 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD9O15198 AC004448.1-201ENST00000458332 883 ntBASIC20.58■□□□□ 0.89
SMAD9O15198 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.58■□□□□ 0.89
SMAD9O15198 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.58■□□□□ 0.88
SMAD9O15198 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD9O15198 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SMAD9O15198 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD9O15198 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.57■□□□□ 0.88
SMAD9O15198 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMAD9O15198 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SMAD9O15198 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.57■□□□□ 0.88
SMAD9O15198 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD9O15198 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SMAD9O15198 TSPY9P-201ENST00000440215 945 ntBASIC20.56■□□□□ 0.88
SMAD9O15198 TSPY11P-201ENST00000442607 1045 ntBASIC20.56■□□□□ 0.88
SMAD9O15198 UNC93B8-201ENST00000511903 705 ntBASIC20.56■□□□□ 0.88
SMAD9O15198 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD9O15198 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD9O15198 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD9O15198 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SMAD9O15198 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SMAD9O15198 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD9O15198 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms