Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM1O00151 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.66■■□□□ 1.06
PDLIM1O00151 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDLIM1O00151 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM1O00151 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM1O00151 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.66■■□□□ 1.06
PDLIM1O00151 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM1O00151 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM1O00151 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM1O00151 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDLIM1O00151 SMPD5-203ENST00000639008 1464 ntBASIC21.65■■□□□ 1.06
PDLIM1O00151 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM1O00151 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDLIM1O00151 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM1O00151 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM1O00151 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
PDLIM1O00151 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM1O00151 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM1O00151 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM1O00151 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM1O00151 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM1O00151 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDLIM1O00151 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDLIM1O00151 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.64■■□□□ 1.05
PDLIM1O00151 ABHD17AP5-201ENST00000580133 923 ntBASIC21.64■■□□□ 1.05
PDLIM1O00151 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.64■■□□□ 1.05
PDLIM1O00151 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM1O00151 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM1O00151 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM1O00151 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM1O00151 AC007029.1-201ENST00000604183 313 ntBASIC21.63■■□□□ 1.05
PDLIM1O00151 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PDLIM1O00151 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM1O00151 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM1O00151 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM1O00151 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PDLIM1O00151 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM1O00151 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.62■■□□□ 1.05
PDLIM1O00151 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.62■■□□□ 1.05
PDLIM1O00151 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM1O00151 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM1O00151 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM1O00151 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM1O00151 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM1O00151 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.61■■□□□ 1.05
PDLIM1O00151 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM1O00151 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.6■■□□□ 1.05
PDLIM1O00151 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.6■■□□□ 1.05
PDLIM1O00151 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM1O00151 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM1O00151 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM1O00151 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.59■■□□□ 1.05
PDLIM1O00151 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PDLIM1O00151 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM1O00151 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM1O00151 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM1O00151 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PDLIM1O00151 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM1O00151 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.58■■□□□ 1.05
PDLIM1O00151 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM1O00151 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PDLIM1O00151 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDLIM1O00151 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.57■■□□□ 1.04
PDLIM1O00151 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.57■■□□□ 1.04
PDLIM1O00151 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM1O00151 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms