Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CCDC196A0A1B0GTZ2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.64■■□□□ 1.85
CCDC196A0A1B0GTZ2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC196A0A1B0GTZ2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC196A0A1B0GTZ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC196A0A1B0GTZ2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC196A0A1B0GTZ2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 MIR6722-201ENST00000617286 78 ntBASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC196A0A1B0GTZ2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC196A0A1B0GTZ2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC196A0A1B0GTZ2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC196A0A1B0GTZ2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC196A0A1B0GTZ2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC196A0A1B0GTZ2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC196A0A1B0GTZ2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC196A0A1B0GTZ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CCDC196A0A1B0GTZ2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC196A0A1B0GTZ2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CCDC196A0A1B0GTZ2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CCDC196A0A1B0GTZ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC196A0A1B0GTZ2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms