Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IRS3P-201ENST00000223076 1006 ntBASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 AC087623.3-201ENST00000607047 1098 ntBASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 AC099791.1-201ENST00000416440 715 ntBASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC187A0A096LP49 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 AC136469.2-201ENST00000623944 1028 ntBASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC187A0A096LP49 C17orf82-201ENST00000623772 1530 ntBASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 AL162430.1-201ENST00000480705 870 ntBASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 MIR6089-201ENST00000616698 64 ntBASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC187A0A096LP49 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC187A0A096LP49 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC187A0A096LP49 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC187A0A096LP49 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC187A0A096LP49 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC187A0A096LP49 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC187A0A096LP49 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC187A0A096LP49 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC187A0A096LP49 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC187A0A096LP49 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.07
CCDC187A0A096LP49 SLC6A10P-202ENST00000431994 2058 ntBASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 AC233992.3-201ENST00000607491 485 ntBASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC187A0A096LP49 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 AC009086.3-201ENST00000623486 1008 ntBASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC187A0A096LP49 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC187A0A096LP49 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC187A0A096LP49 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC187A0A096LP49 BX842568.3-201ENST00000418104 571 ntBASIC21.74■■□□□ 1.07
CCDC187A0A096LP49 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms